Strain Fitness in Shewanella oneidensis MR-1 around SO3754

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,901,942	+		SO3754	0.12	-1.0
3,901,950	-				-1.2
3,901,955	+		SO3754	0.14	+0.8
3,901,977	+		SO3754	0.17	-1.8
3,902,032	+		SO3754	0.25	-0.3
3,902,099	-		SO3754	0.36	+0.3
3,902,099	-		SO3754	0.36	+0.6
3,902,099	-		SO3754	0.36	+0.4
3,902,146	+		SO3754	0.43	+1.2
3,902,151	+		SO3754	0.44	-1.4
3,902,159	+		SO3754	0.45	-2.3
3,902,159	+		SO3754	0.45	+0.5
3,902,167	-		SO3754	0.46	-0.5
3,902,198	+		SO3754	0.51	+0.3
3,902,206	-		SO3754	0.52	+0.3
3,902,284	-		SO3754	0.64	+0.3
3,902,289	-		SO3754	0.65	-0.1
3,902,451	+		SO3754	0.90	-0.6
3,902,459	-				-0.0
3,902,499	+				-1.5
3,902,507	-				-0.1
3,902,588	-		SO3755	0.37	+0.3
3,902,601	+		SO3755	0.44	-0.6
3,902,640	+		SO3755	0.66	-0.2
3,902,716	+				+0.9
3,902,740	-				+0.1
3,902,857	+				+0.1
3,902,909	-				-0.6
3,902,932	+				-0.5
3,902,989	+				+0.2
3,902,992	-				+0.0
3,902,997	-				-0.2
3,903,024	-				-0.6
3,903,148	-		SO3756	0.16	+0.1
3,903,165	-		SO3756	0.18	-0.9
3,903,180	+		SO3756	0.19	+0.8
3,903,222	-		SO3756	0.23	+0.1
3,903,228	+		SO3756	0.24	+0.1
3,903,231	-		SO3756	0.24	+0.7
3,903,397	+		SO3756	0.39	-0.6
3,903,405	-		SO3756	0.40	+0.6
3,903,405	-		SO3756	0.40	-1.3
3,903,449	-		SO3756	0.44	+0.2
3,903,460	-		SO3756	0.45	+1.1
3,903,476	+		SO3756	0.47	+0.8
3,903,477	-		SO3756	0.47	-0.6