Strain Fitness in Shewanella oneidensis MR-1 around SO3654

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,808,991	+				+0.6
3,809,260	-	ung	SO3654	0.44	-0.3
3,809,269	+	ung	SO3654	0.45	-0.3
3,809,269	+	ung	SO3654	0.45	-0.0
3,809,277	-	ung	SO3654	0.47	+1.2
3,809,286	+	ung	SO3654	0.48	+0.6
3,809,379	+	ung	SO3654	0.62	+0.4
3,809,429	+	ung	SO3654	0.70	+0.4
3,809,437	-	ung	SO3654	0.71	+0.4
3,809,437	-	ung	SO3654	0.71	-0.1
3,809,437	-	ung	SO3654	0.71	-0.3
3,809,437	-	ung	SO3654	0.71	-0.2
3,809,457	+	ung	SO3654	0.74	-1.0
3,809,465	-	ung	SO3654	0.75	+0.1
3,809,491	+	ung	SO3654	0.79	+0.8
3,809,505	+	ung	SO3654	0.81	+0.0
3,809,532	-	ung	SO3654	0.85	-0.2
3,809,581	-				-1.1
3,809,581	-				+0.3
3,809,615	-				-3.1
3,809,617	+				+0.4
3,809,713	-				-0.7
3,809,764	-				+0.9
3,809,847	-				-0.9
3,809,877	+		SO3655	0.14	-0.1
3,809,893	+		SO3655	0.17	+0.2
3,810,017	+		SO3655	0.39	-0.1
3,810,045	+		SO3655	0.44	+0.8
3,810,105	-		SO3655	0.55	+0.4
3,810,131	-		SO3655	0.60	+0.1
3,810,215	-		SO3655	0.75	+0.1
3,810,234	+		SO3655	0.78	-0.4
3,810,242	-		SO3655	0.79	+0.3
3,810,257	-		SO3655	0.82	-0.8
3,810,262	-		SO3655	0.83	-0.8
3,810,262	-		SO3655	0.83	+0.4
3,810,262	-		SO3655	0.83	-0.4
3,810,262	-		SO3655	0.83	-0.1
3,810,423	+				-2.0
3,810,500	-		SO3656	0.23	-0.3
3,810,517	+		SO3656	0.28	+0.6
3,810,517	+		SO3656	0.28	+0.2
3,810,517	+		SO3656	0.28	-0.8