Strain Fitness in Shewanella oneidensis MR-1 around SO3243

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,382,479	+	flgI	SO3242	0.32	-1.3
3,382,487	-	flgI	SO3242	0.33	-1.4
3,382,742	+	flgI	SO3242	0.56	-0.0
3,382,760	-	flgI	SO3242	0.58	-1.3
3,382,763	+	flgI	SO3242	0.58	-1.8
3,382,763	+	flgI	SO3242	0.58	+1.4
3,382,763	+	flgI	SO3242	0.58	-2.5
3,382,763	+	flgI	SO3242	0.58	-0.2
3,382,763	+	flgI	SO3242	0.58	-0.3
3,382,763	+	flgI	SO3242	0.58	+0.2
3,382,763	+	flgI	SO3242	0.58	-1.0
3,382,763	+	flgI	SO3242	0.58	-1.0
3,382,763	+	flgI	SO3242	0.58	-1.5
3,382,771	-	flgI	SO3242	0.59	-0.2
3,382,771	-	flgI	SO3242	0.59	-1.6
3,382,771	-	flgI	SO3242	0.59	-2.0
3,382,815	-	flgI	SO3242	0.63	-1.7
3,383,088	+	flgI	SO3242	0.88	-1.3
3,383,096	-	flgI	SO3242	0.88	-0.5
3,383,096	-	flgI	SO3242	0.88	-0.7
3,383,232	+				-1.2
3,383,261	-				-1.2
3,383,266	+				-1.4
3,383,372	-	flgH	SO3243	0.20	-1.4
3,383,383	+	flgH	SO3243	0.22	-1.9
3,383,457	-	flgH	SO3243	0.33	-1.5
3,383,457	-	flgH	SO3243	0.33	-1.5
3,383,468	-	flgH	SO3243	0.35	-0.6
3,383,574	-	flgH	SO3243	0.50	-0.4
3,383,583	+	flgH	SO3243	0.52	-0.9
3,383,734	+	flgH	SO3243	0.74	-2.2
3,383,807	+	flgH	SO3243	0.85	-1.4
3,383,885	+				-1.7
3,383,921	+				-1.6
3,384,017	-	flgG	SO3244	0.12	-1.3
3,384,027	-	flgG	SO3244	0.13	-0.7
3,384,045	-	flgG	SO3244	0.16	-0.7
3,384,116	-	flgG	SO3244	0.25	-1.9
3,384,145	-	flgG	SO3244	0.28	-0.4
3,384,183	+	flgG	SO3244	0.33	-1.3
3,384,256	+	flgG	SO3244	0.42	-1.0
3,384,366	+	flgG	SO3244	0.56	-1.4
3,384,531	+	flgG	SO3244	0.77	+0.4
3,384,573	-	flgG	SO3244	0.83	-0.8
3,384,626	-	flgG	SO3244	0.89	-0.8
3,384,846	-	flgF	SO3245	0.17	-1.6
3,384,852	+	flgF	SO3245	0.18	-0.9
3,384,855	-	flgF	SO3245	0.18	-0.6
3,384,855	-	flgF	SO3245	0.18	+0.3
3,384,906	+	flgF	SO3245	0.25	-0.6