Strain Fitness in Shewanella oneidensis MR-1 around SO2863

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,986,607	+		SO2862	0.40	+0.1
2,986,615	-		SO2862	0.41	+0.5
2,986,631	-		SO2862	0.42	+0.2
2,986,698	+		SO2862	0.48	-0.1
2,986,712	-		SO2862	0.49	+0.5
2,986,805	-		SO2862	0.56	+0.3
2,986,834	+		SO2862	0.59	-0.5
2,986,967	-		SO2862	0.70	-1.0
2,987,211	+				-0.5
2,987,341	+				+0.4
2,987,341	+				-0.4
2,987,341	+				-0.1
2,987,395	-				-0.3
2,987,399	+				+1.0
2,987,409	+				-0.4
2,987,566	+				-0.1
2,987,703	-		SO2863	0.33	-0.0
2,987,776	-		SO2863	0.48	+0.1
2,988,121	+				+0.2
2,988,129	-				+1.0
2,988,208	+				+0.2
2,988,335	+		SO2865	0.12	-0.6
2,988,532	+		SO2865	0.43	+0.0
2,988,570	-		SO2865	0.50	+0.2
2,988,590	-		SO2865	0.53	-0.3
2,988,622	-		SO2865	0.58	-0.8
2,988,714	-		SO2865	0.73	-0.4
2,988,776	+		SO2865	0.83	-0.4
2,988,784	-		SO2865	0.84	-0.1
2,988,785	+		SO2865	0.84	-0.7
2,988,785	-		SO2865	0.84	-0.8
2,988,990	+				+0.1