Strain Fitness in Shewanella oneidensis MR-1 around SO2656

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,791,502	+				-0.6
2,791,502	+				-1.0
2,791,510	-				-0.9
2,791,520	-				+0.6
2,791,520	-				-0.9
2,791,579	+				-0.6
2,791,661	+		SO2655	0.17	+1.9
2,791,672	+		SO2655	0.18	-0.5
2,791,680	-		SO2655	0.19	+0.1
2,791,729	+		SO2655	0.24	+0.7
2,791,737	-		SO2655	0.25	+0.0
2,791,845	+		SO2655	0.36	-0.5
2,791,975	-		SO2655	0.50	-0.4
2,792,096	-		SO2655	0.63	-1.0
2,792,163	-		SO2655	0.70	-0.5
2,792,192	+		SO2655	0.73	+0.1
2,792,315	+		SO2655	0.86	-0.8
2,792,348	-		SO2655	0.89	-0.4
2,792,518	-		SO2656	0.23	+0.9
2,792,641	-		SO2656	0.71	+0.3
2,792,703	-				-1.8
2,792,889	+		SO2657	0.55	-0.4
2,792,939	+		SO2657	0.71	-0.1
2,793,026	+				-0.7
2,793,035	+				+0.3
2,793,083	+		SO2658	0.21	+1.0
2,793,153	+		SO2658	0.52	-0.2
2,793,256	+				-0.5
2,793,405	+		SO2659	0.44	+0.6
2,793,413	-		SO2659	0.46	+0.7
2,793,435	-		SO2659	0.53	-0.4
2,793,467	+		SO2659	0.63	+0.0
2,793,533	+		SO2659	0.83	-0.3
2,793,548	+		SO2659	0.88	+0.3
2,793,553	+		SO2659	0.90	-0.0
2,793,553	+		SO2659	0.90	+0.1
2,793,607	+				-0.8
2,793,632	-				+0.1
2,793,668	-		SO2660	0.11	-0.8