Strain Fitness in Shewanella oneidensis MR-1 around SO2612

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,747,921	+		SO2610	0.75	-0.3
2,747,929	-		SO2610	0.76	-0.3
2,747,962	+		SO2610	0.80	+0.5
2,747,969	-		SO2610	0.81	-0.2
2,748,052	+				-0.4
2,748,052	+				-0.5
2,748,052	+				+0.3
2,748,052	+				-1.8
2,748,052	+				+0.5
2,748,200	-				+1.7
2,748,270	-				-0.4
2,748,415	+				-0.3
2,748,450	-				-0.2
2,748,646	+	pilZ	SO2611	0.61	+0.5
2,748,646	+	pilZ	SO2611	0.61	-0.6
2,750,398	-				+0.5
2,750,406	-				+0.5
2,750,552	-		SO2614	0.20	-1.0
2,750,552	-		SO2614	0.20	+1.5
2,750,572	-		SO2614	0.22	+0.7
2,750,598	-		SO2614	0.24	-0.9
2,750,704	-		SO2614	0.35	+0.7