Strain Fitness in Shewanella oneidensis MR-1 around SO2563

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,691,512	+				+0.3
2,691,528	-				-1.6
2,691,530	-				-0.0
2,691,641	-				-0.2
2,691,761	+		SO2562	0.21	-0.8
2,691,769	-		SO2562	0.23	+0.2
2,691,800	-		SO2562	0.27	-0.0
2,691,850	-		SO2562	0.34	-0.4
2,691,852	+		SO2562	0.34	+0.1
2,691,857	+		SO2562	0.35	+0.3
2,691,857	+		SO2562	0.35	+0.1
2,691,860	-		SO2562	0.35	+0.0
2,691,909	-		SO2562	0.42	+0.4
2,691,909	-		SO2562	0.42	-0.1
2,691,954	+		SO2562	0.48	-1.0
2,692,312	-				+1.8
2,692,319	+				-0.3
2,692,321	+				-0.1
2,692,329	-				+1.9
2,692,408	-				+0.5
2,692,501	-				-1.2
2,692,579	-		SO2563	0.10	+0.5
2,692,662	+		SO2563	0.20	-0.5
2,692,664	+		SO2563	0.21	-2.8
2,692,665	+		SO2563	0.21	-2.5
2,692,723	+		SO2563	0.28	-1.4
2,692,837	-		SO2563	0.42	-1.5
2,692,853	-		SO2563	0.44	-0.8
2,692,965	-		SO2563	0.58	+1.5
2,692,981	-		SO2563	0.60	-1.3
2,693,010	+		SO2563	0.64	-2.1
2,693,082	+		SO2563	0.73	-1.8
2,693,198	+		SO2563	0.87	-2.0
2,693,210	+		SO2563	0.89	-2.5
2,693,210	+		SO2563	0.89	-1.4
2,693,210	+		SO2563	0.89	+0.5
2,693,210	+		SO2563	0.89	-1.3
2,693,246	+				-1.7
2,693,273	+				+0.0
2,693,593	+				-0.8
2,693,593	+				-0.3
2,693,593	+				+0.9
2,693,601	-				-0.7
2,693,601	-				-1.0
2,693,657	-				-3.5
2,693,813	-		SO2564	0.17	-0.2
2,693,843	+		SO2564	0.19	+0.0
2,693,982	+		SO2564	0.28	+0.5
2,693,992	-		SO2564	0.28	+0.5
2,694,063	+		SO2564	0.33	+0.4