Strain Fitness in Shewanella oneidensis MR-1 around SO2559

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,688,391	-		SO2557	0.37	+0.5
2,688,429	+		SO2557	0.40	+0.2
2,688,429	+		SO2557	0.40	-2.1
2,688,444	+		SO2557	0.41	+0.0
2,688,445	-		SO2557	0.41	-0.7
2,688,547	-		SO2557	0.48	+0.2
2,688,547	-		SO2557	0.48	-0.2
2,688,880	+		SO2557	0.71	-0.2
2,688,956	+		SO2557	0.76	-0.8
2,688,976	+		SO2557	0.78	+0.0
2,689,004	-		SO2557	0.79	+0.8
2,689,157	+				-0.5
2,689,264	-				+0.1
2,689,305	+				+0.4
2,690,549	-	rnhA	SO2560	0.78	+0.5
2,690,730	+				+0.2
2,690,802	-		SO2561	0.14	-0.2
2,690,812	+		SO2561	0.15	-0.4
2,690,820	-		SO2561	0.16	+1.7
2,691,002	+		SO2561	0.36	+0.1
2,691,010	-		SO2561	0.37	+0.7