Strain Fitness in Shewanella oneidensis MR-1 around SO2506

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,628,737	-		SO2504	0.10	-0.4
2,628,891	+		SO2504	0.35	-0.9
2,628,922	+		SO2504	0.40	+0.8
2,628,979	+		SO2504	0.49	-0.6
2,629,239	+				-1.6
2,629,247	-				+0.0
2,629,394	-				-0.6
2,629,419	+				-0.1
2,629,427	-				-0.3
2,629,877	-				-2.4
2,629,879	+				-0.9
2,629,897	-				-1.4
2,629,948	+	uvrB	SO2506	0.12	-1.9
2,629,991	-	uvrB	SO2506	0.14	-2.4
2,630,201	+	uvrB	SO2506	0.24	-2.3
2,630,201	+	uvrB	SO2506	0.24	-0.9
2,630,201	+	uvrB	SO2506	0.24	-1.1
2,630,209	-	uvrB	SO2506	0.24	-2.1
2,630,209	-	uvrB	SO2506	0.24	-3.1
2,630,209	-	uvrB	SO2506	0.24	-1.3
2,630,229	-	uvrB	SO2506	0.25	-2.4
2,630,280	-	uvrB	SO2506	0.28	-3.6
2,630,281	+	uvrB	SO2506	0.28	-0.3
2,630,289	-	uvrB	SO2506	0.28	-3.1
2,630,289	-	uvrB	SO2506	0.28	-1.4
2,630,325	-	uvrB	SO2506	0.30	-1.0
2,630,467	+	uvrB	SO2506	0.37	-1.7
2,630,484	+	uvrB	SO2506	0.38	-1.7
2,630,542	+	uvrB	SO2506	0.41	-1.4
2,630,618	-	uvrB	SO2506	0.45	-2.4
2,630,618	-	uvrB	SO2506	0.45	-1.2
2,630,676	+	uvrB	SO2506	0.48	-1.7
2,630,676	+	uvrB	SO2506	0.48	-0.9
2,630,676	+	uvrB	SO2506	0.48	-1.4
2,630,676	+	uvrB	SO2506	0.48	-1.6
2,630,676	+	uvrB	SO2506	0.48	-1.9
2,630,684	-	uvrB	SO2506	0.48	-0.4
2,630,684	-	uvrB	SO2506	0.48	-1.8
2,630,684	-	uvrB	SO2506	0.48	-3.3
2,630,684	-	uvrB	SO2506	0.48	-1.8
2,630,684	-	uvrB	SO2506	0.48	-1.9
2,630,684	-	uvrB	SO2506	0.48	-3.6
2,630,702	-	uvrB	SO2506	0.49	-2.6
2,630,728	+	uvrB	SO2506	0.50	-1.0
2,631,000	+	uvrB	SO2506	0.64	-3.1
2,631,237	-	uvrB	SO2506	0.75	-2.3
2,631,365	-	uvrB	SO2506	0.82	-3.3
2,631,510	+	uvrB	SO2506	0.89	-1.2
2,631,518	-	uvrB	SO2506	0.89	-1.3
2,631,518	-	uvrB	SO2506	0.89	-1.9
2,631,518	-	uvrB	SO2506	0.89	-0.9
2,631,518	-	uvrB	SO2506	0.89	-0.9
2,631,518	-	uvrB	SO2506	0.89	-0.0
2,631,520	-	uvrB	SO2506	0.89	-0.0
2,631,590	+				-2.6
2,631,604	-				-1.4
2,631,606	-				-3.5
2,631,746	+				-2.4
2,631,808	+				+0.7
2,631,995	+				+1.6
2,631,997	+				+2.6
2,632,110	+				-0.6
2,632,301	+				-0.6
2,632,316	+				-0.8
2,632,386	-				+0.7
2,632,409	-				-0.0
2,632,428	-				+0.0
2,632,440	-				+0.9
2,632,509	+				-0.9
2,632,522	-				-1.0
2,632,549	+				+0.3
2,632,549	+				-1.2
2,632,557	-				-0.4
2,632,557	-				+0.8
2,632,589	-				-0.0
2,632,599	-				-0.2