Strain Fitness in Shewanella oneidensis MR-1 around SO2440

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,552,984	-				+0.6
2,552,994	+				+1.1
2,553,002	-				-1.0
2,553,023	+				-0.1
2,553,056	-				-0.8
2,553,057	+				-0.7
2,553,065	-				+1.1
2,553,319	+		SO2439	0.87	+0.6
2,553,327	-		SO2439	0.88	+0.1
2,553,351	-		SO2439	0.89	-0.1
2,553,372	-		SO2439	0.90	-0.0
2,553,562	+				-1.9
2,553,598	-				-1.1
2,553,702	-		SO2439.2	0.41	-1.4
2,553,717	+		SO2439.2	0.47	-0.4
2,553,759	+		SO2439.2	0.63	-0.3
2,553,767	-		SO2439.2	0.66	-1.2
2,553,826	-		SO2439.2	0.88	+0.2
2,553,920	+				+2.1
2,553,927	-				-1.0
2,554,063	-				+0.4
2,554,065	-				-0.4
2,554,065	-				+0.9
2,554,148	+	thiH	SO2440	0.16	-0.1
2,554,159	+	thiH	SO2440	0.17	-0.3
2,554,305	+	thiH	SO2440	0.30	-1.6
2,554,305	+	thiH	SO2440	0.30	+0.3
2,554,429	+	thiH	SO2440	0.41	-0.0
2,554,437	-	thiH	SO2440	0.42	+0.1
2,554,541	-	thiH	SO2440	0.51	+0.3
2,554,672	+	thiH	SO2440	0.62	-0.3
2,554,710	+	thiH	SO2440	0.66	+0.4
2,554,737	-	thiH	SO2440	0.68	-0.4
2,554,794	-	thiH	SO2440	0.73	+1.3
2,554,794	-	thiH	SO2440	0.73	-0.2
2,554,809	-	thiH	SO2440	0.75	-3.1
2,554,866	+	thiH	SO2440	0.80	+0.1
2,554,866	+	thiH	SO2440	0.80	-0.4
2,554,874	-	thiH	SO2440	0.80	+0.7
2,554,874	-	thiH	SO2440	0.80	-0.2
2,554,874	-	thiH	SO2440	0.80	-0.5
2,554,914	+	thiH	SO2440	0.84	+1.0
2,555,122	+				+0.6
2,555,122	+				-0.6
2,555,147	+				-0.4
2,555,156	-				+0.0
2,555,243	+	thiG	SO2441	0.20	-1.1
2,555,243	+	thiG	SO2441	0.20	-0.7
2,555,251	-	thiG	SO2441	0.21	+0.0
2,555,410	+	thiG	SO2441	0.42	+0.3
2,555,433	-	thiG	SO2441	0.45	-0.9
2,555,489	-	thiG	SO2441	0.52	-0.2
2,555,522	-	thiG	SO2441	0.56	+1.6
2,555,563	+	thiG	SO2441	0.62	+0.9
2,555,580	+	thiG	SO2441	0.64	+1.0
2,555,855	+				+0.5
2,555,919	-	thiS	SO2442	0.30	+0.1