Strain Fitness in Shewanella oneidensis MR-1 around SO2238

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,354,095	+	ptsI	SO2237	0.50	+0.1
2,354,211	-	ptsI	SO2237	0.57	-1.0
2,354,460	+	ptsI	SO2237	0.71	-0.2
2,354,468	-	ptsI	SO2237	0.72	+0.6
2,354,660	+	ptsI	SO2237	0.83	+1.4
2,354,792	+				-0.1
2,354,892	+				-1.8
2,354,892	-				-0.1
2,354,900	-				-0.3
2,354,907	-				-0.2
2,354,988	-				+0.6
2,355,196	-	ptsH	SO2238	0.84	-0.8
2,355,372	-				+0.6
2,355,494	-		SO2239	0.58	+1.0
2,355,533	-		SO2239	0.68	-0.6
2,355,535	-		SO2239	0.69	-0.8
2,355,725	-				-0.0
2,355,725	-				-1.6
2,355,740	+				-0.2
2,355,833	+				+0.3
2,355,846	+				-0.7
2,355,846	+				+1.1
2,355,854	-				-1.4
2,355,881	-				-0.2
2,355,881	-				-0.1
2,355,964	+				-0.2
2,356,121	+		SO2240	0.18	-1.2