Strain Fitness in Shewanella oneidensis MR-1 around SO2149

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,259,487	-				+1.6
2,263,394	-				-0.3
2,263,480	-				+1.2
2,263,742	+		SO2150	0.16	+0.5
2,263,756	+		SO2150	0.16	-0.2
2,263,756	+		SO2150	0.16	+0.3
2,263,756	+		SO2150	0.16	-0.3
2,263,756	+		SO2150	0.16	-0.3
2,263,771	+		SO2150	0.17	-1.0
2,263,779	-		SO2150	0.17	+1.3
2,263,950	+				-0.4
2,264,059	+		SO2150	0.30	-0.3
2,264,064	+		SO2150	0.30	-0.7
2,264,195	-		SO2150	0.36	-0.4
2,264,275	-		SO2150	0.40	+0.5
2,264,277	-		SO2150	0.40	+2.6