Strain Fitness in Shewanella oneidensis MR-1 around SO1961

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,065,845	-				-0.1
2,065,891	-				+0.2
2,066,164	+		SO1960	0.52	+0.8
2,066,253	-		SO1960	0.72	+0.5
2,066,665	+				-2.0
2,066,683	-				+0.2
2,066,780	+				+0.2
2,066,893	-				+0.0
2,067,187	+	maa	SO1961	0.59	+0.6
2,067,267	+	maa	SO1961	0.73	+0.0
2,067,275	-	maa	SO1961	0.74	-0.1
2,067,275	-	maa	SO1961	0.74	-0.3
2,067,275	-	maa	SO1961	0.74	-0.1
2,067,275	-	maa	SO1961	0.74	+0.1
2,067,344	-	maa	SO1961	0.86	+0.3
2,067,344	-	maa	SO1961	0.86	-0.7
2,067,374	+				-0.3
2,067,433	-				-0.6
2,067,547	+				-0.4
2,067,547	+				-0.4
2,067,557	+				-0.8
2,067,560	-				+0.1
2,067,694	+		SO1962	0.18	+0.6
2,067,816	-		SO1962	0.29	+0.6
2,067,933	+		SO1962	0.41	-0.7
2,067,935	+		SO1962	0.41	-1.4
2,067,950	+		SO1962	0.42	-0.1
2,067,950	+		SO1962	0.42	-0.2
2,068,043	+		SO1962	0.51	+0.2
2,068,171	-		SO1962	0.63	-0.4
2,068,224	-		SO1962	0.69	-0.3