Strain Fitness in Shewanella oneidensis MR-1 around SO1866

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,957,107	+				+0.6
1,957,107	-				+0.5
1,957,115	+				+0.9
1,957,127	+				-0.5
1,957,127	+				+0.2
1,957,127	+				-0.5
1,957,127	+				-0.1
1,957,127	+				+0.0
1,957,133	-				-0.6
1,957,135	-				+0.9
1,957,135	-				-0.2
1,957,135	-				+0.2
1,957,166	+				+0.7
1,957,186	-				+0.5
1,957,188	-				+0.2
1,957,188	-				+0.3
1,957,212	+				+1.8
1,957,234	-				-0.5
1,957,234	-				+0.2
1,957,234	-				-0.7
1,957,234	-				-2.7
1,957,234	-				-0.3
1,957,244	-				-0.4
1,957,260	+				-0.5
1,957,267	-				-0.3
1,957,352	-		SO1865	0.17	+0.1
1,957,385	+		SO1865	0.21	-0.2
1,957,390	+		SO1865	0.21	-1.0
1,957,393	-		SO1865	0.22	-0.0
1,957,393	-		SO1865	0.22	+0.7
1,957,395	+		SO1865	0.22	-1.9
1,957,403	-		SO1865	0.23	-0.7
1,957,411	+		SO1865	0.24	-0.9
1,957,429	+		SO1865	0.26	-0.3
1,957,479	+		SO1865	0.31	-0.6
1,957,484	+		SO1865	0.32	-0.0
1,957,484	+		SO1865	0.32	-0.1
1,957,666	+		SO1865	0.52	+0.2
1,957,701	+		SO1865	0.56	+0.0
1,957,701	+		SO1865	0.56	+0.4
1,957,941	+		SO1865	0.82	-0.0
1,957,941	+		SO1865	0.82	+0.1
1,957,952	+		SO1865	0.83	-0.5
1,957,952	+		SO1865	0.83	-0.8
1,957,952	+		SO1865	0.83	-0.4
1,957,969	-		SO1865	0.85	-0.2
1,958,099	-				-0.7
1,958,106	-				-0.3
1,958,162	-				+0.8
1,958,163	+				+0.5
1,958,224	+		SO1866	0.15	-1.7
1,958,420	-		SO1866	0.39	-1.4
1,958,652	+		SO1866	0.66	+0.2
1,958,781	+		SO1866	0.82	-0.2
1,958,804	-		SO1866	0.85	-0.3
1,958,882	-				-0.2
1,958,900	+				+0.9
1,959,097	-		SO1867	0.11	-1.2
1,959,117	+		SO1867	0.14	-0.7
1,959,117	+		SO1867	0.14	-0.2
1,959,183	-		SO1867	0.24	-0.2
1,959,183	-		SO1867	0.24	-0.7
1,959,185	+		SO1867	0.24	-0.1
1,959,188	-		SO1867	0.25	-0.3
1,959,193	-		SO1867	0.25	-1.3
1,959,211	+		SO1867	0.28	-0.2
1,959,211	+		SO1867	0.28	-0.6
1,959,211	+		SO1867	0.28	+0.0
1,959,294	+		SO1867	0.40	+0.3
1,959,417	-		SO1867	0.59	-1.3
1,959,536	-		SO1867	0.77	+0.4
1,959,551	+		SO1867	0.79	+0.2
1,959,594	+		SO1867	0.85	-0.3
1,959,673	-				+0.5
1,959,673	-				-1.3
1,959,682	-				-0.9
1,959,754	-				+0.1
1,959,807	+				-0.1
1,959,815	-				-0.2
1,959,815	-				+0.4
1,959,815	-				-0.4
1,959,815	-				-1.3
1,959,815	-				-0.0
1,959,876	+				+0.8
1,959,885	-				-0.3
1,959,911	+				-0.6
1,959,911	+				+0.4