Strain Fitness in Shewanella oneidensis MR-1 around SO1817

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,905,430	+		SO1815	0.75	-0.7
1,905,468	+		SO1815	0.79	-0.5
1,905,476	-		SO1815	0.80	+0.2
1,905,530	-		SO1815	0.86	-0.9
1,905,568	+				-0.3
1,905,604	+				-0.2
1,905,750	+		SO1816	0.13	+0.6
1,905,750	+		SO1816	0.13	-0.1
1,905,765	+		SO1816	0.15	+0.9
1,905,829	-		SO1816	0.24	-0.2
1,905,907	-		SO1816	0.36	+0.5
1,905,975	-		SO1816	0.46	-0.3
1,905,982	+		SO1816	0.47	+0.9
1,905,982	+		SO1816	0.47	+0.7
1,905,990	-		SO1816	0.48	+0.1
1,905,990	-		SO1816	0.48	+0.1
1,905,990	-		SO1816	0.48	-0.1
1,906,085	-		SO1816	0.62	+0.1
1,906,278	-				-0.4
1,906,374	-				+0.7
1,906,557	-		SO1817	0.30	-0.9
1,906,932	-		SO1817	0.86	-1.1
1,907,001	+				+1.0
1,907,076	-				+1.3
1,907,164	-		SO1818	0.20	+0.1
1,907,185	-		SO1818	0.22	+0.7
1,907,230	+		SO1818	0.28	-0.6
1,907,238	-		SO1818	0.29	-1.7
1,907,422	-		SO1818	0.53	+0.5
1,907,427	-		SO1818	0.53	-0.5
1,907,480	+		SO1818	0.60	-0.1
1,907,509	-		SO1818	0.64	+0.3
1,907,511	+		SO1818	0.64	+0.1
1,907,519	-		SO1818	0.65	-0.2
1,907,519	-		SO1818	0.65	-0.1
1,907,519	-		SO1818	0.65	+0.2
1,907,574	+		SO1818	0.72	-0.2
1,907,667	+		SO1818	0.84	-0.3
1,907,672	+		SO1818	0.85	+0.9
1,907,818	-				-1.7
1,907,910	-				-1.3
1,908,009	+	dinG	SO1819	0.10	-2.5
1,908,017	-	dinG	SO1819	0.11	-1.4
1,908,017	-	dinG	SO1819	0.11	-2.5
1,908,017	-	dinG	SO1819	0.11	-2.5