Strain Fitness in Shewanella oneidensis MR-1 around SO1529

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,604,042	+		SO_1527	0.38	-0.0
1,604,129	-		SO_1527	0.73	+0.1
1,604,208	+				+0.1
1,604,235	-				+0.9
1,604,347	-				+0.1
1,604,417	+				+0.7
1,604,419	-				-1.6
1,604,431	+				-1.2
1,604,431	+				-0.1
1,604,439	-				-0.8
1,604,482	-				-0.9
1,604,553	-				-1.1
1,604,573	+				-1.0
1,604,735	-	pomA	SO1529	0.29	-0.8
1,604,901	-	pomA	SO1529	0.51	-1.1
1,605,281	-				-0.6
1,605,320	-				-0.9
1,605,406	+	pomB	SO1530	0.13	-1.1
1,605,414	-	pomB	SO1530	0.14	-1.9
1,605,569	+	pomB	SO1530	0.31	-0.5
1,605,579	+	pomB	SO1530	0.32	-1.3
1,605,614	+	pomB	SO1530	0.36	-1.0
1,605,622	-	pomB	SO1530	0.37	-0.5
1,605,933	-	pomB	SO1530	0.70	-2.1
1,606,045	-	pomB	SO1530	0.82	-1.3
1,606,233	-				+0.1