Strain Fitness in Shewanella oneidensis MR-1 around SO1385

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,440,430	-		SO1383	0.66	+0.4
1,440,432	+		SO1383	0.67	-1.3
1,440,440	-		SO1383	0.67	+1.8
1,440,454	-		SO1383	0.68	-0.5
1,440,620	-		SO1383	0.81	-0.9
1,440,755	-				-1.8
1,441,041	+				+0.6
1,441,041	+				-0.5
1,441,292	-				-0.3
1,441,337	+				+0.6
1,441,371	+		SO1385	0.12	+0.0
1,441,371	+		SO1385	0.12	-0.6
1,441,410	-		SO1385	0.15	+0.1
1,441,445	+		SO1385	0.17	-1.0
1,441,551	+		SO1385	0.24	-0.6
1,441,591	-		SO1385	0.26	-1.1
1,441,730	-		SO1385	0.35	-0.4
1,441,780	+		SO1385	0.38	-1.3
1,441,799	+		SO1385	0.39	+0.9
1,441,805	-		SO1385	0.40	-0.2
1,441,807	-		SO1385	0.40	+0.8
1,441,811	+		SO1385	0.40	+0.0
1,441,957	-		SO1385	0.50	-2.2
1,441,983	-		SO1385	0.51	+0.5
1,442,221	+		SO1385	0.66	-0.1
1,442,229	-		SO1385	0.67	-0.4
1,442,241	+		SO1385	0.68	-0.3
1,442,249	-		SO1385	0.68	-0.3
1,442,311	+		SO1385	0.72	-0.5
1,442,347	+		SO1385	0.75	+1.4
1,442,355	-		SO1385	0.75	-0.6
1,442,437	-		SO1385	0.80	-0.2
1,442,541	-		SO1385	0.87	-1.4
1,442,541	-		SO1385	0.87	+0.3
1,442,614	-				-0.9
1,442,629	-				+0.1
1,442,708	+				-0.8
1,442,723	+				-0.1
1,442,736	-				-0.7
1,442,742	+				+0.3
1,442,742	+				-0.1
1,442,742	+				+0.3
1,442,742	+				-0.7
1,442,742	+				-1.2
1,442,742	+				+0.2
1,442,750	-				+0.2
1,442,822	-				+1.8
1,442,962	+				-0.2
1,442,970	-				+0.1
1,443,083	+				+0.5
1,443,083	-				-0.2
1,443,101	+				-0.6
1,443,109	+				-1.2
1,443,190	+				-0.2
1,443,197	+				+0.2
1,443,245	+				-0.3
1,443,258	-				+2.8
1,443,258	-				-0.4
1,443,258	-				-0.1
1,443,344	+				-0.9
1,443,348	+				+0.1
1,443,362	+		SO1387	0.11	+0.6
1,443,477	+		SO1387	0.20	+0.6
1,443,495	+		SO1387	0.22	-0.4
1,443,550	-		SO1387	0.26	-0.4
1,443,560	-		SO1387	0.27	+0.2
1,443,683	+		SO1387	0.36	+0.2