Strain Fitness in Shewanella oneidensis MR-1 around SO1112

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,153,248	+				+0.3
1,153,486	-				+0.2
1,153,817	+	bfr2	SO1111	0.21	+0.1
1,153,835	+	bfr2	SO1111	0.24	+0.3
1,153,870	+	bfr2	SO1111	0.32	-0.8
1,153,882	+	bfr2	SO1111	0.34	-0.7
1,153,890	-	bfr2	SO1111	0.36	+0.2
1,153,917	+	bfr2	SO1111	0.42	+1.6
1,154,016	-	bfr2	SO1111	0.63	-0.8
1,154,029	+	bfr2	SO1111	0.65	+0.4
1,154,029	+	bfr2	SO1111	0.65	-0.7
1,154,029	+	bfr2	SO1111	0.65	+0.3
1,154,029	+	bfr2	SO1111	0.65	-0.4
1,154,029	+	bfr2	SO1111	0.65	-0.1
1,154,029	+	bfr2	SO1111	0.65	+0.2
1,154,029	+	bfr2	SO1111	0.65	-1.0
1,154,029	+	bfr2	SO1111	0.65	-0.8
1,154,029	+	bfr2	SO1111	0.65	-1.3
1,154,037	-	bfr2	SO1111	0.67	+0.8
1,154,037	-	bfr2	SO1111	0.67	+0.1
1,154,037	-	bfr2	SO1111	0.67	+0.2
1,154,037	-	bfr2	SO1111	0.67	+1.3
1,154,037	-	bfr2	SO1111	0.67	+0.1
1,154,037	-	bfr2	SO1111	0.67	-0.2
1,154,037	-	bfr2	SO1111	0.67	+0.6
1,154,054	+	bfr2	SO1111	0.71	+0.1
1,154,193	-				-0.8
1,154,302	+	bfr1	SO1112	0.21	-1.1
1,154,373	-	bfr1	SO1112	0.37	+0.2
1,154,413	-	bfr1	SO1112	0.45	-1.5
1,154,413	-	bfr1	SO1112	0.45	-0.6
1,154,589	+	bfr1	SO1112	0.83	-2.4
1,154,901	-				+0.5
1,154,986	+				-1.2
1,155,040	-				-0.5
1,155,220	+		SO1112.1	0.14	-0.4
1,155,220	+		SO1112.1	0.14	+0.5
1,155,228	-		SO1112.1	0.15	-0.8