Strain Fitness in Shewanella oneidensis MR-1 around SO0844

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
865,561	+				-1.5
865,574	+				+0.3
865,616	+		SO0843	0.12	+1.7
865,624	-		SO0843	0.13	-0.3
865,714	+		SO0843	0.23	-0.4
865,749	+		SO0843	0.27	+0.1
865,803	-		SO0843	0.33	-0.1
865,854	-		SO0843	0.39	-0.2
865,937	+		SO0843	0.48	+1.1
865,937	+		SO0843	0.48	-0.2
865,937	+		SO0843	0.48	+0.9
865,937	+		SO0843	0.48	+0.9
865,937	+		SO0843	0.48	-0.1
865,945	-		SO0843	0.49	+0.1
865,945	-		SO0843	0.49	-1.9
865,945	-		SO0843	0.49	-1.6
866,036	+		SO0843	0.60	+0.4
866,080	+		SO0843	0.65	-1.5
866,103	+		SO0843	0.67	-1.0
866,111	-		SO0843	0.68	+1.0
866,386	+				-0.1
866,469	+				+0.4
866,578	-		SO0844	0.60	-0.9
866,683	-				+0.7
866,755	+				-1.5
866,774	-				-0.1
866,786	-				-1.2
866,869	+	napB	SO0845	0.13	+0.3
866,950	+	napB	SO0845	0.31	-0.1
866,958	-	napB	SO0845	0.33	+1.1
866,958	-	napB	SO0845	0.33	-0.3
866,958	-				+2.4
866,965	+	napB	SO0845	0.35	-1.0
866,965	+	napB	SO0845	0.35	-0.4
866,973	-	napB	SO0845	0.37	+0.9
867,066	+	napB	SO0845	0.58	+0.4
867,132	+	napB	SO0845	0.74	+0.4
867,163	+	napB	SO0845	0.81	-0.5
867,188	+	napB	SO0845	0.87	+0.1
867,297	+				-0.3
867,390	-	napH	SO0846	0.15	+0.1
867,391	+	napH	SO0846	0.16	+0.6
867,448	-	napH	SO0846	0.21	+0.1
867,461	+	napH	SO0846	0.23	-0.8
867,461	+	napH	SO0846	0.23	+0.4
867,461	+	napH	SO0846	0.23	-0.2
867,515	+	napH	SO0846	0.28	-0.3
867,585	+	napH	SO0846	0.36	-3.2
867,623	-	napH	SO0846	0.40	-0.3