Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0013 and glyS are separated by 68 nucleotides glyS and glyQ are separated by 9 nucleotides
SO0013: SO0013 - hypothetical protein (NCBI ptt file), at 14,311 to 15,111
SO0013
SO0014: glyS - glycyl-tRNA synthetase, beta subunit (NCBI ptt file), at 15,180 to 17,246
glyS
SO0015: glyQ - glycyl-tRNA synthetase, alpha subunit (NCBI ptt file), at 17,256 to 18,161
glyQ
Position (kb) 15
16
17
18 Strain fitness (log2 ratio) -1
0
1 at 14.219 kb on + strand at 14.224 kb on + strand at 14.227 kb on - strand at 14.294 kb on + strand at 14.294 kb on + strand at 14.295 kb on + strand at 14.295 kb on - strand at 14.306 kb on + strand at 14.328 kb on + strand at 14.328 kb on + strand at 14.328 kb on + strand at 14.328 kb on + strand at 14.328 kb on + strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.383 kb on + strand at 14.410 kb on + strand, within SO0013 at 14.463 kb on + strand, within SO0013 at 14.468 kb on + strand, within SO0013 at 14.468 kb on + strand, within SO0013 at 14.468 kb on + strand, within SO0013 at 14.468 kb on + strand, within SO0013 at 14.468 kb on + strand, within SO0013 at 14.476 kb on - strand, within SO0013 at 14.476 kb on - strand, within SO0013 at 14.476 kb on - strand, within SO0013 at 14.487 kb on + strand, within SO0013 at 14.531 kb on + strand, within SO0013 at 14.531 kb on + strand, within SO0013 at 14.531 kb on + strand, within SO0013 at 14.531 kb on + strand, within SO0013 at 14.539 kb on - strand, within SO0013 at 14.539 kb on - strand, within SO0013 at 14.551 kb on - strand, within SO0013 at 14.802 kb on - strand, within SO0013 at 14.855 kb on + strand, within SO0013 at 14.855 kb on + strand, within SO0013 at 14.855 kb on + strand, within SO0013 at 14.855 kb on + strand, within SO0013 at 14.863 kb on - strand, within SO0013 at 14.863 kb on - strand, within SO0013 at 14.863 kb on - strand, within SO0013 at 14.962 kb on + strand, within SO0013 at 14.962 kb on + strand, within SO0013 at 15.054 kb on + strand at 15.054 kb on + strand at 15.111 kb on - strand at 15.113 kb on - strand at 18.212 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.004 vol% remove 14,219 + -0.3 14,224 + -1.2 14,227 - +1.5 14,294 + +0.2 14,294 + -0.4 14,295 + -1.2 14,295 - -0.6 14,306 + -0.5 14,328 + -0.2 14,328 + +1.5 14,328 + -0.4 14,328 + +0.1 14,328 + +0.2 14,336 - -0.3 14,336 - -1.0 14,336 - +0.7 14,336 - +0.2 14,383 + +0.3 14,410 + SO0013 0.12 +0.3 14,463 + SO0013 0.19 +0.7 14,468 + SO0013 0.20 -0.2 14,468 + SO0013 0.20 -0.0 14,468 + SO0013 0.20 -0.8 14,468 + SO0013 0.20 -1.3 14,468 + SO0013 0.20 +0.4 14,476 - SO0013 0.21 +0.8 14,476 - SO0013 0.21 +0.3 14,476 - SO0013 0.21 +0.3 14,487 + SO0013 0.22 -0.2 14,531 + SO0013 0.27 -0.2 14,531 + SO0013 0.27 +0.2 14,531 + SO0013 0.27 -0.5 14,531 + SO0013 0.27 +0.3 14,539 - SO0013 0.28 -0.3 14,539 - SO0013 0.28 -0.1 14,551 - SO0013 0.30 +0.6 14,802 - SO0013 0.61 +0.7 14,855 + SO0013 0.68 -1.3 14,855 + SO0013 0.68 -0.7 14,855 + SO0013 0.68 +0.9 14,855 + SO0013 0.68 +0.0 14,863 - SO0013 0.69 -0.0 14,863 - SO0013 0.69 +0.4 14,863 - SO0013 0.69 +0.7 14,962 + SO0013 0.81 +0.3 14,962 + SO0013 0.81 +0.3 15,054 + -0.2 15,054 + -0.4 15,111 - +0.5 15,113 - +0.8 18,212 - +0.3
Or see this region's nucleotide sequence