Strain Fitness in Shewanella oneidensis MR-1 around SO0009

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
9,363	-				-0.3
9,368	+				-0.4
9,418	+				-0.2
9,418	+				-0.1
9,426	-				-0.3
9,426	-				+0.2
9,427	+				-1.9
9,507	-				-2.7
9,507	-				-2.2
9,507	-				-2.9
9,507	-				-0.3
9,543	+				-2.9
9,543	+				-2.5
9,551	-				-1.6
9,551	-				-1.6
9,617	-				-3.3
9,617	-				-1.5
9,746	-	recF	SO0010	0.19	-2.9
9,756	+	recF	SO0010	0.20	-1.9
9,764	-	recF	SO0010	0.21	-1.5
9,842	+	recF	SO0010	0.28	-3.9
9,863	+	recF	SO0010	0.30	-2.7
9,966	-	recF	SO0010	0.39	-1.5
10,144	+	recF	SO0010	0.56	-1.7
10,144	+	recF	SO0010	0.56	-3.8
10,144	+	recF	SO0010	0.56	-2.8
10,177	+	recF	SO0010	0.59	-3.9
10,259	+	recF	SO0010	0.66	-1.5
10,291	+	recF	SO0010	0.69	-2.4