Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1012

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,094,731	+		Psest_1010	0.63	-0.6
1,094,740	+		Psest_1010	0.64	-0.8
1,094,811	+		Psest_1010	0.72	-0.1
1,094,811	+		Psest_1010	0.72	+0.4
1,094,811	+		Psest_1010	0.72	-0.1
1,094,811	+		Psest_1010	0.72	+0.4
1,094,812	-		Psest_1010	0.72	+1.0
1,094,812	-		Psest_1010	0.72	+0.0
1,094,812	-		Psest_1010	0.72	+0.7
1,094,812	-		Psest_1010	0.72	-2.8
1,094,812	-		Psest_1010	0.72	+0.3
1,094,904	+		Psest_1010	0.82	-0.5
1,094,988	+				+0.1
1,094,989	-				-1.0
1,094,989	-				+0.9
1,094,989	-				-0.0
1,095,005	+				+1.4
1,095,015	-				+0.3
1,095,158	+				-0.0
1,095,158	+				-1.8
1,095,158	+				+0.8
1,095,158	+				-0.3
1,095,159	-				+1.0
1,095,439	+				+0.6
1,095,440	-				-0.2
1,095,442	+				-0.0
1,095,442	+				+1.3
1,095,442	+				+1.1
1,095,442	+				-0.4
1,095,442	+				-0.0
1,095,442	+				-0.9
1,095,443	-				-1.9
1,095,443	-				+1.0
1,095,443	-				+0.0
1,095,953	+				-1.3
1,096,391	+		Psest_1012	0.24	-1.9
1,096,666	+		Psest_1012	0.34	+0.6
1,097,576	+		Psest_1012	0.66	-0.1
1,097,706	+		Psest_1012	0.71	-1.7
1,097,706	+		Psest_1012	0.71	-0.9
1,097,768	+		Psest_1012	0.73	-0.1
1,097,768	+		Psest_1012	0.73	-1.7
1,097,769	-		Psest_1012	0.73	-1.9
1,097,769	-		Psest_1012	0.73	-2.6
1,097,769	-		Psest_1012	0.73	-1.6
1,097,769	-		Psest_1012	0.73	-4.3
1,097,856	+		Psest_1012	0.76	-1.7
1,097,897	+		Psest_1012	0.77	-2.0
1,097,897	+		Psest_1012	0.77	-2.6
1,098,029	+		Psest_1012	0.82	-2.3
1,098,029	+		Psest_1012	0.82	-2.6
1,098,029	+		Psest_1012	0.82	-0.4
1,098,029	+		Psest_1012	0.82	-2.4
1,098,029	+		Psest_1012	0.82	+0.0
1,098,029	+		Psest_1012	0.82	+0.1
1,098,029	+		Psest_1012	0.82	-2.1
1,098,158	+		Psest_1012	0.87	-0.9
1,098,170	+		Psest_1012	0.87	-0.7
1,098,532	+				-1.4
1,098,535	-				+0.9
1,098,535	-				+0.6
1,098,535	-				+1.4
1,098,575	-				-1.0
1,098,575	-				-0.4
1,098,760	-		Psest_1013	0.11	-1.9
1,098,878	-		Psest_1013	0.20	-1.7
1,098,945	+		Psest_1013	0.26	-2.4
1,098,946	-		Psest_1013	0.26	-1.9
1,099,099	+		Psest_1013	0.37	-1.4
1,099,114	+		Psest_1013	0.39	-1.9
1,099,114	+		Psest_1013	0.39	-0.6
1,099,115	-		Psest_1013	0.39	-2.7
1,099,179	-		Psest_1013	0.44	+0.4
1,099,213	+		Psest_1013	0.46	+0.9
1,099,214	-		Psest_1013	0.46	+0.2
1,099,510	+		Psest_1013	0.69	-0.7
1,099,510	+		Psest_1013	0.69	-2.1
1,099,510	+		Psest_1013	0.69	+0.1
1,099,510	+		Psest_1013	0.69	-1.1
1,099,510	+		Psest_1013	0.69	-1.4
1,099,510	+		Psest_1013	0.69	-2.6