Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0999

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,081,632	-		Psest_0998	0.84	-1.7
1,081,686	-		Psest_0998	0.88	-0.6
1,081,686	-		Psest_0998	0.88	-1.0
1,081,686	-		Psest_0998	0.88	-1.3
1,081,686	-		Psest_0998	0.88	+1.2
1,081,922	-				-0.6
1,082,118	-				-0.5
1,082,118	-				+1.0
1,082,132	+				+1.0
1,082,132	+				-0.6
1,082,132	+				-0.9
1,082,133	-				+0.1
1,082,138	+				-1.2
1,082,138	+				+1.1
1,082,138	+				-0.6
1,082,139	-				+1.3
1,082,139	-				-0.2
1,082,139	-				-1.7
1,082,139	-				-0.9
1,082,141	+				+0.7
1,082,142	-				-0.8
1,082,210	+				-1.9
1,082,210	+				+0.4
1,082,210	+				-0.8
1,082,210	+				-0.4
1,082,210	+				-0.5
1,082,211	-				+0.5
1,082,211	-				-0.1
1,082,211	-				+0.4
1,082,213	-				+0.1
1,082,215	+				-0.0
1,082,215	+				+0.9
1,082,215	+				+0.5
1,082,216	-				+0.5
1,082,216	-				-1.2
1,082,216	-				+0.7
1,082,216	-				-1.7
1,082,216	-				-0.6
1,082,222	+				-0.2
1,082,222	+				-0.8
1,082,222	+				+0.3
1,082,222	+				+0.1
1,082,223	-				+0.4
1,082,225	+				+0.9
1,082,225	+				+0.3
1,082,225	+				-0.2
1,082,225	+				+1.3
1,082,226	-				+0.1
1,082,226	-				+0.1
1,082,305	-				+0.1
1,082,305	-				+0.5
1,082,365	+				+0.4
1,082,365	+				-0.1
1,082,750	+		Psest_0999	0.10	-0.7
1,082,955	-		Psest_0999	0.25	-0.4
1,083,114	-		Psest_0999	0.36	-1.5
1,083,734	+		Psest_0999	0.80	-1.1
1,083,734	+		Psest_0999	0.80	-0.1
1,083,734	+		Psest_0999	0.80	-2.4
1,083,734	+		Psest_0999	0.80	-2.6
1,083,734	+		Psest_0999	0.80	-2.0
1,083,734	+		Psest_0999	0.80	+0.1
1,083,735	-		Psest_0999	0.80	-0.0
1,083,735	-		Psest_0999	0.80	+0.3
1,083,785	+		Psest_0999	0.84	-1.4
1,084,022	-				-1.1
1,084,022	-				-1.0
1,084,085	+				-2.4
1,084,086	-				-0.0
1,084,086	-				+0.0
1,084,326	+				-0.9
1,084,327	-				+0.2