Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0773

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
840,379	+				+0.9
840,379	+				-0.9
840,380	-				-1.5
840,380	-				+0.4
840,380	-				-0.1
840,384	+				+0.2
840,385	-				-1.7
840,385	-				+0.2
840,487	+				+0.0
840,509	+				+0.4
840,509	+				-0.1
840,509	+				+1.1
840,510	-				+2.2
840,510	-				-1.2
840,631	+				+0.4
840,631	+				-1.3
840,631	+				-0.2
840,766	+		Psest_0772	0.12	-0.1
840,767	-		Psest_0772	0.12	-0.8
840,767	-		Psest_0772	0.12	-0.5
840,838	+		Psest_0772	0.22	+0.6
840,908	-		Psest_0772	0.32	+0.5
841,015	+		Psest_0772	0.48	-0.3
841,016	-		Psest_0772	0.48	+1.7
841,016	-		Psest_0772	0.48	-0.5
841,174	+		Psest_0772	0.71	+0.4
841,175	-		Psest_0772	0.71	-1.2
841,289	-		Psest_0772	0.88	-0.2
841,289	-		Psest_0772	0.88	+1.4
841,755	-		Psest_0773	0.32	+0.4
841,858	+		Psest_0773	0.40	+0.7
841,858	+		Psest_0773	0.40	+0.3
841,859	-		Psest_0773	0.40	+1.7
841,859	-		Psest_0773	0.40	+0.0
841,903	-		Psest_0773	0.44	-1.7
842,217	-		Psest_0773	0.69	+0.8
842,454	+		Psest_0773	0.88	+1.0
842,457	+		Psest_0773	0.88	+1.1
842,457	+		Psest_0773	0.88	-0.4
842,682	+				-0.5
842,683	-				+0.4
842,683	-				+0.1
842,683	-				+1.0
842,683	-				+0.2
842,683	-				-2.1
842,683	-				-0.2
842,683	-				+0.5
842,684	+				-0.2
842,685	-				+0.1
842,685	-				-0.9
842,685	-				-0.8
842,685	-				-0.7
842,685	-				-1.0
842,685	-				-0.2
842,685	-				+0.8
842,685	-				+0.9
842,685	-				-1.0
842,685	-				+0.1
842,685	-				-0.3
842,705	-				+0.1
842,738	+				+1.1
842,738	+				+1.9
842,762	+		Psest_0774	0.12	+0.2
842,762	+		Psest_0774	0.12	+2.4
842,786	+		Psest_0774	0.13	+0.7
842,787	-		Psest_0774	0.14	+0.6
842,787	-		Psest_0774	0.14	-0.2
842,787	-		Psest_0774	0.14	+0.9
842,843	+		Psest_0774	0.18	-0.2
842,843	+		Psest_0774	0.18	+0.5
842,843	+		Psest_0774	0.18	+0.2
842,843	+		Psest_0774	0.18	-1.0
842,858	-		Psest_0774	0.19	+1.4
842,918	+		Psest_0774	0.24	-0.3
842,918	+		Psest_0774	0.24	-1.2
842,918	+		Psest_0774	0.24	+0.1
842,918	+		Psest_0774	0.24	-1.5
842,918	+		Psest_0774	0.24	-0.6
842,918	+		Psest_0774	0.24	+0.5
842,918	+		Psest_0774	0.24	-0.0
842,919	-		Psest_0774	0.24	+0.1
842,919	-		Psest_0774	0.24	+1.6
842,919	-		Psest_0774	0.24	-0.7
842,919	-		Psest_0774	0.24	+1.7
843,023	+		Psest_0774	0.32	+0.2
843,023	+		Psest_0774	0.32	-1.0
843,023	+		Psest_0774	0.32	-1.2
843,024	-		Psest_0774	0.32	+1.6
843,024	-		Psest_0774	0.32	-0.6
843,385	+		Psest_0774	0.60	-2.0
843,385	+		Psest_0774	0.60	+0.9
843,560	+		Psest_0774	0.74	+0.4
843,568	+		Psest_0774	0.75	+0.1
843,568	+		Psest_0774	0.75	-1.6
843,569	-		Psest_0774	0.75	+1.5