Experiment: LB 30C timecourse1 timepoint 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4193 and Psest_4194 are separated by 66 nucleotides Psest_4194 and Psest_4195 are separated by 2 nucleotides
Psest_4193: Psest_4193 - Predicted signal transduction protein, at 4,371,816 to 4,373,219
_4193
Psest_4194: Psest_4194 - Type II secretory pathway, component PulM, at 4,373,286 to 4,373,798
_4194
Psest_4195: Psest_4195 - general secretion pathway protein L, at 4,373,801 to 4,374,934
_4195
Position (kb)
4373
4374 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4372.366 kb on + strand, within Psest_4193 at 4372.533 kb on + strand, within Psest_4193 at 4372.534 kb on - strand, within Psest_4193 at 4372.537 kb on - strand, within Psest_4193 at 4372.680 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.698 kb on + strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.699 kb on - strand, within Psest_4193 at 4372.701 kb on - strand, within Psest_4193 at 4372.801 kb on - strand, within Psest_4193 at 4372.801 kb on - strand, within Psest_4193 at 4372.801 kb on - strand, within Psest_4193 at 4373.001 kb on + strand, within Psest_4193 at 4373.123 kb on + strand at 4373.124 kb on - strand at 4373.124 kb on - strand at 4373.126 kb on + strand at 4373.127 kb on - strand at 4373.182 kb on + strand at 4373.182 kb on + strand at 4373.410 kb on + strand, within Psest_4194 at 4373.410 kb on + strand, within Psest_4194 at 4373.410 kb on + strand, within Psest_4194 at 4373.411 kb on - strand, within Psest_4194 at 4373.411 kb on - strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.587 kb on + strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.588 kb on - strand, within Psest_4194 at 4373.614 kb on + strand, within Psest_4194 at 4373.618 kb on - strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.668 kb on + strand, within Psest_4194 at 4373.669 kb on - strand, within Psest_4194 at 4373.669 kb on - strand, within Psest_4194 at 4373.930 kb on + strand, within Psest_4195 at 4373.930 kb on + strand, within Psest_4195 at 4373.931 kb on - strand, within Psest_4195 at 4373.964 kb on + strand, within Psest_4195 at 4373.964 kb on + strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4373.965 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.178 kb on - strand, within Psest_4195 at 4374.329 kb on + strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.330 kb on - strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.512 kb on + strand, within Psest_4195 at 4374.513 kb on - strand, within Psest_4195
Per-strain Table
Position Strand Gene LocusTag Fraction LB 30C timecourse1 timepoint 1 remove 4,372,366 + Psest_4193 0.39 +0.2 4,372,533 + Psest_4193 0.51 +0.2 4,372,534 - Psest_4193 0.51 +3.2 4,372,537 - Psest_4193 0.51 -0.8 4,372,680 + Psest_4193 0.62 +0.6 4,372,698 + Psest_4193 0.63 -0.4 4,372,698 + Psest_4193 0.63 +2.1 4,372,698 + Psest_4193 0.63 -0.1 4,372,698 + Psest_4193 0.63 -1.4 4,372,698 + Psest_4193 0.63 +0.4 4,372,698 + Psest_4193 0.63 -2.1 4,372,698 + Psest_4193 0.63 +1.0 4,372,698 + Psest_4193 0.63 +0.8 4,372,699 - Psest_4193 0.63 +0.5 4,372,699 - Psest_4193 0.63 +0.7 4,372,699 - Psest_4193 0.63 -1.8 4,372,699 - Psest_4193 0.63 -1.8 4,372,699 - Psest_4193 0.63 -2.7 4,372,699 - Psest_4193 0.63 -1.1 4,372,699 - Psest_4193 0.63 -0.4 4,372,699 - Psest_4193 0.63 +1.7 4,372,699 - Psest_4193 0.63 -0.5 4,372,699 - Psest_4193 0.63 +0.3 4,372,699 - Psest_4193 0.63 +0.7 4,372,699 - Psest_4193 0.63 -2.4 4,372,699 - Psest_4193 0.63 -0.0 4,372,699 - Psest_4193 0.63 -0.7 4,372,699 - Psest_4193 0.63 -1.4 4,372,699 - Psest_4193 0.63 -1.4 4,372,701 - Psest_4193 0.63 -0.3 4,372,801 - Psest_4193 0.70 +0.2 4,372,801 - Psest_4193 0.70 +0.2 4,372,801 - Psest_4193 0.70 -2.2 4,373,001 + Psest_4193 0.84 +0.7 4,373,123 + -1.9 4,373,124 - +0.1 4,373,124 - +0.9 4,373,126 + -1.8 4,373,127 - +0.3 4,373,182 + +2.6 4,373,182 + +0.5 4,373,410 + Psest_4194 0.24 -0.9 4,373,410 + Psest_4194 0.24 -2.2 4,373,410 + Psest_4194 0.24 +0.4 4,373,411 - Psest_4194 0.24 -0.4 4,373,411 - Psest_4194 0.24 +0.1 4,373,587 + Psest_4194 0.59 -0.8 4,373,587 + Psest_4194 0.59 -1.1 4,373,587 + Psest_4194 0.59 -0.5 4,373,587 + Psest_4194 0.59 +0.6 4,373,587 + Psest_4194 0.59 -1.9 4,373,587 + Psest_4194 0.59 -0.4 4,373,587 + Psest_4194 0.59 -0.8 4,373,587 + Psest_4194 0.59 -1.6 4,373,587 + Psest_4194 0.59 -1.6 4,373,588 - Psest_4194 0.59 -0.2 4,373,588 - Psest_4194 0.59 +2.2 4,373,588 - Psest_4194 0.59 -1.4 4,373,588 - Psest_4194 0.59 -2.1 4,373,588 - Psest_4194 0.59 -1.9 4,373,588 - Psest_4194 0.59 -1.8 4,373,588 - Psest_4194 0.59 -1.8 4,373,588 - Psest_4194 0.59 +0.6 4,373,614 + Psest_4194 0.64 -1.1 4,373,618 - Psest_4194 0.65 -1.1 4,373,668 + Psest_4194 0.74 +3.2 4,373,668 + Psest_4194 0.74 +0.2 4,373,668 + Psest_4194 0.74 -0.8 4,373,669 - Psest_4194 0.75 +0.1 4,373,669 - Psest_4194 0.75 -2.2 4,373,930 + Psest_4195 0.11 +1.2 4,373,930 + Psest_4195 0.11 +2.8 4,373,931 - Psest_4195 0.11 +0.6 4,373,964 + Psest_4195 0.14 -0.8 4,373,964 + Psest_4195 0.14 +0.9 4,373,965 - Psest_4195 0.14 -0.9 4,373,965 - Psest_4195 0.14 +0.7 4,373,965 - Psest_4195 0.14 +0.7 4,374,178 - Psest_4195 0.33 -1.4 4,374,178 - Psest_4195 0.33 +1.0 4,374,178 - Psest_4195 0.33 -0.4 4,374,329 + Psest_4195 0.47 +1.2 4,374,330 - Psest_4195 0.47 -0.4 4,374,330 - Psest_4195 0.47 -0.4 4,374,330 - Psest_4195 0.47 -1.5 4,374,512 + Psest_4195 0.63 -1.1 4,374,512 + Psest_4195 0.63 -0.8 4,374,512 + Psest_4195 0.63 +1.4 4,374,512 + Psest_4195 0.63 +0.7 4,374,513 - Psest_4195 0.63 +1.8
Or see this region's nucleotide sequence