Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4051

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
4,224,047	+		Psest_4049	0.35	-2.1
4,224,165	-		Psest_4049	0.63	-0.8
4,224,572	-				-1.5
4,224,611	+				+0.3
4,224,611	+				-0.6
4,224,611	+				-0.3
4,224,611	+				-0.2
4,224,612	-				-0.5
4,224,612	-				+1.5
4,224,612	-				-0.7
4,224,789	-		Psest_4050	0.83	-0.7
4,224,853	+				+0.3
4,224,853	+				-2.1
4,224,853	+				+0.4
4,224,853	+				-2.8
4,224,853	+				-0.7
4,224,854	-				-0.3
4,224,854	-				-1.7
4,224,854	-				+0.7
4,224,854	-				-1.1
4,224,854	-				-1.6
4,224,854	-				+0.7
4,224,854	-				-0.6
4,224,885	-				+0.3
4,225,073	+		Psest_4051	0.58	-1.5
4,225,074	-		Psest_4051	0.59	-2.3
4,225,074	-		Psest_4051	0.59	-2.4
4,225,074	-		Psest_4051	0.59	-0.1
4,225,074	-		Psest_4051	0.59	-0.3
4,225,184	+				-0.3
4,225,270	+		Psest_4052	0.11	-1.5
4,225,270	+		Psest_4052	0.11	+1.3
4,225,372	+		Psest_4052	0.24	-1.2
4,225,474	+		Psest_4052	0.36	+0.3
4,225,475	-		Psest_4052	0.36	+0.5
4,225,475	-		Psest_4052	0.36	-0.0
4,225,475	-		Psest_4052	0.36	-0.9
4,225,475	-		Psest_4052	0.36	+1.0
4,225,538	-		Psest_4052	0.44	+0.3
4,225,538	-		Psest_4052	0.44	+0.5
4,225,904	-				+1.6
4,225,941	+				-1.3
4,225,942	-				-1.5
4,225,942	-				-0.3
4,226,005	+				+1.7
4,226,006	-				+0.9