Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4044

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
4,213,523	+		Psest_4042	0.89	+0.1
4,213,524	-		Psest_4042	0.90	+0.1
4,213,524	-		Psest_4042	0.90	-0.5
4,213,573	+				-3.1
4,213,574	-				-1.2
4,213,580	-				-0.2
4,213,580	-				+1.1
4,213,614	+				-1.9
4,213,614	+				-0.2
4,213,614	+				+0.7
4,213,615	-				+0.9
4,213,657	-		Psest_4043	0.17	+0.5
4,213,657	-		Psest_4043	0.17	-0.4
4,213,665	+		Psest_4043	0.18	+0.0
4,214,083	-				-0.6
4,214,093	-				+0.0
4,214,150	+				+0.3
4,214,203	+				+0.5
4,214,203	+				+0.5
4,214,203	+				+0.3
4,214,251	+				-1.1
4,214,251	+				-1.3
4,214,251	+				-1.0
4,214,251	+				-2.0
4,214,251	+				+0.6
4,214,252	-				+0.1
4,214,252	-				-0.0
4,214,252	-				+0.6
4,214,252	-				+1.3
4,214,252	-				+2.3
4,214,252	-				-1.8
4,214,252	-				-0.4
4,214,252	-				+0.2
4,214,252	-				-0.5
4,214,253	+				-1.2
4,214,253	+				-0.5
4,214,253	+				+0.7
4,214,253	+				+0.0
4,214,254	-				-1.5
4,214,254	-				-0.7
4,214,254	-				+0.0
4,214,254	-				+0.9
4,214,254	-				+0.5
4,214,254	-				-0.4
4,214,382	-				-0.8
4,214,394	+				-0.3
4,214,668	+				-1.5
4,214,668	+				-0.7
4,214,668	+				-0.4
4,214,668	+				-1.9
4,214,864	+		Psest_4044	0.14	-3.0
4,214,997	-		Psest_4044	0.19	-0.9
4,215,295	+		Psest_4044	0.28	-0.1
4,215,387	-		Psest_4044	0.31	+0.4
4,215,403	+		Psest_4044	0.32	+0.1
4,215,404	-		Psest_4044	0.32	-1.1
4,215,404	-		Psest_4044	0.32	-2.6
4,215,404	-		Psest_4044	0.32	-0.1
4,215,404	-		Psest_4044	0.32	-2.4
4,215,446	-		Psest_4044	0.33	-2.2
4,215,446	-		Psest_4044	0.33	+0.5
4,215,541	+		Psest_4044	0.36	-0.7
4,215,542	-		Psest_4044	0.36	-1.7
4,215,542	-		Psest_4044	0.36	-2.8
4,215,769	-		Psest_4044	0.43	-0.3
4,215,769	-		Psest_4044	0.43	-0.1
4,215,782	-		Psest_4044	0.44	-0.4
4,215,782	-		Psest_4044	0.44	-3.1
4,216,112	-		Psest_4044	0.54	-2.1
4,216,112	-		Psest_4044	0.54	+2.1
4,216,112	-		Psest_4044	0.54	+0.3
4,216,134	-		Psest_4044	0.55	-2.4
4,216,167	-		Psest_4044	0.56	-2.1
4,216,228	+		Psest_4044	0.58	-2.2
4,216,228	+		Psest_4044	0.58	-0.3
4,216,228	+		Psest_4044	0.58	-0.8
4,216,228	+		Psest_4044	0.58	-1.9
4,216,228	+		Psest_4044	0.58	+0.9
4,216,489	-		Psest_4044	0.66	-0.4
4,216,826	-		Psest_4044	0.77	-2.3
4,216,931	+		Psest_4044	0.80	-1.7
4,216,931	+		Psest_4044	0.80	-0.1
4,216,932	-		Psest_4044	0.80	-2.3
4,216,932	-		Psest_4044	0.80	-0.4
4,217,032	+		Psest_4044	0.83	+0.7
4,217,032	+		Psest_4044	0.83	-1.2
4,217,032	+		Psest_4044	0.83	+1.0
4,217,032	+		Psest_4044	0.83	+0.1
4,217,033	-		Psest_4044	0.83	-1.6
4,217,033	-		Psest_4044	0.83	-2.1
4,217,033	-		Psest_4044	0.83	-2.2
4,217,033	-		Psest_4044	0.83	-1.7
4,217,033	-		Psest_4044	0.83	-1.1
4,217,033	-		Psest_4044	0.83	+0.7
4,217,033	-		Psest_4044	0.83	-3.0
4,217,205	-		Psest_4044	0.89	+1.3
4,217,227	+		Psest_4044	0.89	-1.7
4,217,228	-		Psest_4044	0.89	-0.5
4,217,706	+				+0.4
4,217,706	+				-0.5
4,217,706	+				+0.2
4,217,706	+				+0.4
4,217,706	+				-0.2
4,217,707	-				-0.3
4,217,707	-				+0.3
4,217,707	-				-0.3
4,217,800	+				-2.2
4,217,865	+		Psest_4045	0.13	-0.7
4,217,865	+		Psest_4045	0.13	-0.3
4,217,865	+		Psest_4045	0.13	+0.1
4,217,866	-		Psest_4045	0.13	-0.5
4,217,866	-		Psest_4045	0.13	+0.8
4,217,866	-		Psest_4045	0.13	+0.8
4,217,866	-		Psest_4045	0.13	-1.5
4,217,866	-		Psest_4045	0.13	-0.1
4,217,972	+		Psest_4045	0.20	+0.2
4,218,034	+		Psest_4045	0.25	-1.1
4,218,313	+		Psest_4045	0.44	-1.0
4,218,324	+		Psest_4045	0.45	-0.3
4,218,324	+		Psest_4045	0.45	-1.2
4,218,324	+		Psest_4045	0.45	-0.5
4,218,325	-		Psest_4045	0.45	+0.9
4,218,325	-		Psest_4045	0.45	+1.9
4,218,325	-		Psest_4045	0.45	+0.5
4,218,325	-		Psest_4045	0.45	+0.1
4,218,325	-		Psest_4045	0.45	+0.0
4,218,409	-		Psest_4045	0.51	+0.3
4,218,522	-		Psest_4045	0.59	-0.2