Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3979

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
4,146,543	-		Psest_3978	0.33	-1.5
4,146,543	-		Psest_3978	0.33	-0.3
4,146,680	+		Psest_3978	0.44	-0.6
4,146,680	+		Psest_3978	0.44	-1.8
4,146,693	-		Psest_3978	0.45	+2.0
4,146,705	-		Psest_3978	0.46	-0.1
4,146,839	+		Psest_3978	0.57	+0.6
4,147,085	-		Psest_3978	0.78	-0.6
4,147,125	+		Psest_3978	0.81	-1.3
4,147,191	+		Psest_3978	0.86	+0.0
4,147,191	+		Psest_3978	0.86	-0.5
4,147,191	+		Psest_3978	0.86	-0.6
4,147,191	+		Psest_3978	0.86	-1.0
4,147,191	+		Psest_3978	0.86	+0.7
4,147,191	+		Psest_3978	0.86	+0.3
4,147,191	+		Psest_3978	0.86	+1.5
4,147,191	+		Psest_3978	0.86	+0.1
4,147,191	+		Psest_3978	0.86	-0.1
4,147,191	+		Psest_3978	0.86	-0.8
4,147,191	+		Psest_3978	0.86	+1.1
4,147,192	-		Psest_3978	0.86	+0.1
4,147,375	+				-0.9
4,147,376	-				-0.5
4,147,394	+				+0.6
4,147,394	+				+0.7
4,147,412	+				+2.3
4,147,412	+				+0.7
4,147,951	+		Psest_3979	0.84	-0.4
4,147,952	-		Psest_3979	0.84	+0.9
4,147,952	-		Psest_3979	0.84	-1.5
4,148,462	+		Psest_3980	0.71	-1.9
4,148,558	+				-0.7
4,148,558	+				-1.5
4,148,558	+				-1.0
4,148,558	+				-0.9
4,148,558	+				-0.9
4,148,586	-				+1.1
4,148,586	-				+1.0
4,148,591	+				+0.3
4,148,600	+				+0.0
4,148,600	+				+1.6
4,148,600	+				+0.1
4,148,600	+				-1.3
4,148,601	-				+0.6
4,148,601	-				+0.1
4,148,601	-				-1.5
4,148,601	-				-0.6
4,148,601	-				-0.3
4,148,609	+				-0.5
4,148,609	+				+0.6
4,148,609	+				-0.8
4,148,609	+				-0.5
4,148,609	+				-0.3
4,148,609	+				-0.3
4,148,609	+				-1.2
4,148,610	-				+0.5
4,148,610	-				-0.6
4,148,610	-				-0.5
4,148,610	-				+0.7
4,148,610	-				+0.7
4,148,610	-				+1.3
4,148,610	-				-0.6
4,148,610	-				+0.5
4,148,610	-				-1.2
4,148,613	+				-1.6
4,148,613	+				+0.4
4,148,613	+				+0.6
4,148,613	+				-0.3
4,148,614	-				-1.3
4,148,614	-				+0.5
4,148,614	-				+0.2
4,148,614	-				+0.0
4,148,614	-				-0.3
4,148,614	-				-0.1
4,148,614	-				+0.3
4,148,614	-				+1.0
4,148,614	-				+0.6
4,148,614	-				-1.6
4,148,614	-				-1.0
4,148,614	-				-1.5
4,148,614	-				+1.7
4,148,616	+				+0.7
4,148,616	+				-0.6
4,148,616	+				+0.5
4,148,616	+				-0.0
4,148,616	+				+0.2
4,148,617	-				-0.5
4,148,617	-				+0.5
4,148,617	-				-0.2
4,148,708	+				-1.0
4,148,708	+				+0.1
4,148,709	-				+0.1
4,148,709	-				+0.6
4,148,709	-				-0.5
4,148,760	-				+0.4
4,148,760	-				+0.4
4,148,760	-				+0.7
4,148,804	+		Psest_3981	0.15	+0.5
4,148,804	+		Psest_3981	0.15	-1.0
4,148,804	+		Psest_3981	0.15	-1.7
4,148,805	-		Psest_3981	0.15	+1.3
4,148,957	+		Psest_3981	0.42	+2.0
4,148,958	-		Psest_3981	0.42	+0.3
4,148,990	+		Psest_3981	0.47	+0.3
4,149,008	+		Psest_3981	0.50	-0.0
4,149,008	+		Psest_3981	0.50	-1.4
4,149,008	+		Psest_3981	0.50	+0.6
4,149,008	+		Psest_3981	0.50	-0.8
4,149,008	+		Psest_3981	0.50	+0.4
4,149,008	+		Psest_3981	0.50	+1.0
4,149,009	-		Psest_3981	0.51	-0.1
4,149,009	-		Psest_3981	0.51	+0.1
4,149,009	-		Psest_3981	0.51	+0.2
4,149,015	+		Psest_3981	0.52	-0.7
4,149,015	+		Psest_3981	0.52	-1.3
4,149,015	+		Psest_3981	0.52	-0.5
4,149,016	-		Psest_3981	0.52	+0.3
4,149,016	-		Psest_3981	0.52	-0.3
4,149,016	-		Psest_3981	0.52	-0.2
4,149,017	+		Psest_3981	0.52	-2.3
4,149,017	+		Psest_3981	0.52	-0.3
4,149,017	+		Psest_3981	0.52	+0.1
4,149,017	+		Psest_3981	0.52	-1.4
4,149,017	+		Psest_3981	0.52	+0.2
4,149,017	+		Psest_3981	0.52	-1.1
4,149,017	+		Psest_3981	0.52	-0.5
4,149,017	+		Psest_3981	0.52	+0.9
4,149,017	+		Psest_3981	0.52	-0.5
4,149,017	+		Psest_3981	0.52	+1.3
4,149,017	+		Psest_3981	0.52	+0.6
4,149,017	+		Psest_3981	0.52	-1.5
4,149,017	+		Psest_3981	0.52	+1.1
4,149,017	+		Psest_3981	0.52	+1.3
4,149,017	+		Psest_3981	0.52	+1.3
4,149,017	+		Psest_3981	0.52	+1.6
4,149,017	+		Psest_3981	0.52	+0.1
4,149,017	+		Psest_3981	0.52	+1.9
4,149,017	+		Psest_3981	0.52	+0.2
4,149,017	+		Psest_3981	0.52	+0.4
4,149,017	+		Psest_3981	0.52	-1.7
4,149,018	-		Psest_3981	0.52	-1.0
4,149,018	-		Psest_3981	0.52	+0.2
4,149,018	-		Psest_3981	0.52	+0.0
4,149,018	-		Psest_3981	0.52	-0.2
4,149,018	-		Psest_3981	0.52	+0.4
4,149,018	-		Psest_3981	0.52	-0.6
4,149,018	-		Psest_3981	0.52	+0.1
4,149,018	-		Psest_3981	0.52	-0.6
4,149,018	-		Psest_3981	0.52	-0.0
4,149,018	-		Psest_3981	0.52	-0.4
4,149,018	-		Psest_3981	0.52	-1.8
4,149,018	-		Psest_3981	0.52	+1.3
4,149,018	-		Psest_3981	0.52	-0.3
4,149,018	-		Psest_3981	0.52	-1.2
4,149,018	-		Psest_3981	0.52	-0.0
4,149,018	-		Psest_3981	0.52	+0.0
4,149,018	-		Psest_3981	0.52	-1.2
4,149,018	-		Psest_3981	0.52	+0.5
4,149,018	-		Psest_3981	0.52	-0.8
4,149,018	-		Psest_3981	0.52	+0.2
4,149,018	-		Psest_3981	0.52	-0.5
4,149,018	-		Psest_3981	0.52	-1.5
4,149,018	-		Psest_3981	0.52	+0.2
4,149,018	-		Psest_3981	0.52	-1.3
4,149,042	+		Psest_3981	0.56	+1.3