Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3496

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
3,668,200	+				+1.0
3,668,200	+				+0.5
3,668,200	+				+2.1
3,668,200	+				-0.5
3,668,200	+				+1.5
3,668,200	+				+0.8
3,668,201	-				+0.9
3,668,201	-				+2.0
3,668,244	-				+1.2
3,668,254	+				-0.5
3,668,254	+				-1.5
3,668,254	+				+0.2
3,668,254	+				-0.1
3,668,254	+				-1.6
3,668,254	+				+2.0
3,668,254	+				-0.9
3,668,254	+				+0.9
3,668,254	+				-2.5
3,668,254	+				+0.9
3,668,254	+				-0.5
3,668,254	+				-1.5
3,668,254	+				-1.4
3,668,254	+				-1.1
3,668,255	-				+0.6
3,668,255	-				+0.5
3,668,255	-				-0.9
3,668,255	-				+0.6
3,668,255	-				+0.1
3,668,255	-				+1.1
3,668,255	-				-0.1
3,668,255	-				+1.0
3,668,255	-				-0.1
3,668,257	+				+1.0
3,668,258	-				-0.2
3,668,276	+				-0.5
3,668,277	-				+1.3
3,668,414	+		Psest_3495	0.17	+1.1
3,668,414	+		Psest_3495	0.17	-1.1
3,668,415	-		Psest_3495	0.17	+1.9
3,668,552	+		Psest_3495	0.36	-1.9
3,668,552	+		Psest_3495	0.36	+0.9
3,668,616	+		Psest_3495	0.44	+0.5
3,668,616	+		Psest_3495	0.44	-0.2
3,668,616	+		Psest_3495	0.44	+1.5
3,668,616	+		Psest_3495	0.44	+0.5
3,668,811	+		Psest_3495	0.71	-0.9
3,668,811	+		Psest_3495	0.71	+0.2
3,668,811	+		Psest_3495	0.71	-0.4
3,668,811	+		Psest_3495	0.71	-1.5
3,668,812	-		Psest_3495	0.71	-0.1
3,669,145	+				-0.5
3,669,145	+				-1.0
3,669,145	+				-0.5
3,669,146	-				+0.8
3,669,426	+		Psest_3496	0.64	-2.5
3,669,426	+		Psest_3496	0.64	+0.5
3,669,427	-		Psest_3496	0.65	+0.7
3,669,744	+				+0.9
3,669,745	-				-0.7
3,669,809	-		Psest_3497	0.12	+1.5
3,670,088	+		Psest_3497	0.44	+0.0
3,670,088	+		Psest_3497	0.44	-1.1
3,670,089	-		Psest_3497	0.44	+0.7
3,670,181	+		Psest_3497	0.55	-0.9
3,670,181	+		Psest_3497	0.55	+0.7
3,670,181	+		Psest_3497	0.55	+0.2
3,670,181	+		Psest_3497	0.55	+1.5
3,670,182	-				+0.5
3,670,182	-		Psest_3497	0.55	-0.1
3,670,182	-		Psest_3497	0.55	-0.9
3,670,182	-		Psest_3497	0.55	-0.2
3,670,565	+				-0.4