Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1563

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,662,210	+		Psest_1561	0.84	+0.3
1,662,219	-		Psest_1561	0.85	-0.3
1,662,376	-				+0.2
1,662,438	-				-1.0
1,662,760	+		Psest_1562	0.49	+0.3
1,662,876	+		Psest_1562	0.66	+1.3
1,663,051	+				+1.3
1,663,700	-		Psest_1563	0.67	-0.3
1,663,700	-		Psest_1563	0.67	-1.4
1,663,700	-		Psest_1563	0.67	-0.3
1,663,700	-		Psest_1563	0.67	-0.3
1,663,927	+				-0.3
1,663,928	-				+1.5
1,663,997	+				-0.2
1,663,997	+				+1.1
1,664,011	+				-1.3
1,664,012	-				+0.3
1,664,012	-				+0.2
1,664,030	-				+1.5
1,664,030	-				+1.3
1,664,457	-		Psest_1564	0.74	-0.1
1,664,603	-				-1.0
1,664,631	+				+1.3
1,664,632	-				-0.7
1,664,632	-				-1.0
1,664,632	-				+0.9
1,664,663	+				-0.7
1,664,666	-				+0.5
1,664,675	+				-0.3
1,664,675	+				+0.1
1,664,677	+				-0.2
1,664,677	+				+0.6
1,664,677	+				-2.0
1,664,677	+				+2.0
1,664,677	+				-0.3
1,664,677	+				+0.9
1,664,677	+				-0.7
1,664,677	+				-1.0
1,664,677	+				-0.7
1,664,677	+				+1.3
1,664,677	+				+0.7
1,664,677	+				+0.3
1,664,677	+				+2.2
1,664,677	+				+0.7
1,664,677	+				-0.3
1,664,677	+				+0.7
1,664,678	-				-0.5
1,664,678	-				-0.0
1,664,678	-				-1.7
1,664,678	-				-0.5
1,664,678	-				+0.3
1,664,678	-				-1.0
1,664,678	-				+0.5
1,664,681	+				+0.2
1,664,681	+				+0.3
1,664,681	+				-0.8
1,664,682	-				-0.0
1,664,908	-		Psest_1565	0.17	-1.7
1,664,909	+		Psest_1565	0.18	-0.3
1,664,909	+		Psest_1565	0.18	-0.6
1,664,910	-		Psest_1565	0.18	+2.3
1,664,910	-		Psest_1565	0.18	-0.3