Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1457

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,565,750	+		Psest_1455	0.90	-0.8
1,565,750	+		Psest_1455	0.90	+0.1
1,565,750	+		Psest_1455	0.90	-1.7
1,565,751	-		Psest_1455	0.90	+0.1
1,565,773	+				+2.9
1,565,774	-				-0.9
1,565,774	-				+0.4
1,565,983	+		Psest_1456	0.21	+0.4
1,566,197	+		Psest_1456	0.75	-1.6
1,566,197	+		Psest_1456	0.75	+0.9
1,566,200	+		Psest_1456	0.76	-0.0
1,566,200	+		Psest_1456	0.76	-0.3
1,566,200	+		Psest_1456	0.76	-0.1
1,566,201	-		Psest_1456	0.76	+0.2
1,566,201	-		Psest_1456	0.76	+0.7
1,566,201	-		Psest_1456	0.76	+0.9
1,566,341	+				+1.5
1,566,341	+				+0.1
1,566,341	+				-0.4
1,566,341	+				-0.2
1,566,341	+				+2.8
1,566,341	+				+0.3
1,566,341	+				-3.5
1,566,342	-				+1.0
1,566,342	-				-1.9
1,566,342	-				+0.7
1,566,342	-				-0.4
1,566,498	-		Psest_1457	0.23	-0.3
1,566,722	+		Psest_1457	0.66	-1.3
1,566,723	-		Psest_1457	0.66	-0.4
1,566,922	-				-0.3
1,566,947	-				+1.5
1,566,947	-				+0.3
1,566,993	+				-2.3
1,566,994	-				+0.1
1,566,994	-				+1.3
1,566,994	-				+0.6
1,566,994	-				-2.5
1,567,015	+				-0.4
1,567,015	+				-1.1
1,567,015	+				-0.3
1,567,015	+				-0.9
1,567,015	+				+0.8
1,567,015	+				-0.5
1,567,015	+				-0.1
1,567,015	+				-0.0
1,567,015	+				-2.0
1,567,015	+				+0.7
1,567,015	+				+0.3
1,567,015	+				+0.1
1,567,015	+				-0.8
1,567,016	-				+0.5
1,567,016	-				-1.5
1,567,016	-				-0.2
1,567,016	-				-0.4
1,567,016	-				-0.5
1,567,016	-				+0.8
1,567,016	-				+0.3
1,567,016	-				-1.3
1,567,016	-				-0.0
1,567,016	-				-0.9
1,567,016	-				-1.7
1,567,016	-				-0.2
1,567,016	-				-1.1
1,567,016	-				-0.2
1,567,016	-				-0.7
1,567,016	-				-1.4
1,567,016	-				-0.1
1,567,016	-				+1.3
1,567,016	-				-0.4
1,567,258	+		Psest_1458	0.25	+0.3
1,567,258	+		Psest_1458	0.25	-0.6
1,567,259	-		Psest_1458	0.25	-1.1
1,567,259	-		Psest_1458	0.25	+0.5
1,567,259	-		Psest_1458	0.25	-0.1
1,567,259	-		Psest_1458	0.25	+0.1
1,567,259	-		Psest_1458	0.25	+0.8
1,567,259	-		Psest_1458	0.25	-0.1
1,567,295	-		Psest_1458	0.42	+0.5
1,567,420	+				+0.7
1,567,421	-				+0.2
1,567,449	+				+0.0
1,567,450	-				+1.0
1,567,494	+				-0.4
1,567,494	+				+0.1
1,567,494	+				+0.6
1,567,494	+				+1.2
1,567,494	+				+0.0
1,567,494	+				-0.3
1,567,494	+				-0.9
1,567,495	-				-1.1
1,567,495	-				+1.3
1,567,495	-				+0.3
1,567,495	-				+0.0
1,567,495	-				+0.7
1,567,495	-				-0.0
1,567,495	-				-0.1
1,567,495	-				+0.5
1,567,543	+		Psest_1459	0.18	-1.9
1,567,543	+		Psest_1459	0.18	-1.9
1,567,544	-		Psest_1459	0.18	-1.9
1,567,544	-		Psest_1459	0.18	+0.1
1,567,545	+		Psest_1459	0.18	+1.2
1,567,545	+		Psest_1459	0.18	-0.5
1,567,603	-		Psest_1459	0.29	-0.3
1,567,797	-		Psest_1459	0.66	-0.7
1,567,797	-		Psest_1459	0.66	-0.4
1,567,836	+		Psest_1459	0.73	-0.7
1,567,836	+		Psest_1459	0.73	-0.5