Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1417

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,524,804	+		Psest_1415	0.86	-1.5
1,524,812	-		Psest_1415	0.87	-0.1
1,524,813	+		Psest_1415	0.87	+0.1
1,524,830	+		Psest_1415	0.88	-0.2
1,524,830	+		Psest_1415	0.88	-0.2
1,524,850	+		Psest_1415	0.89	-1.6
1,524,850	+		Psest_1415	0.89	+1.6
1,524,856	-		Psest_1415	0.89	+0.5
1,524,922	+				+1.3
1,524,922	+				-0.5
1,524,922	+				+0.9
1,524,978	+				+0.4
1,524,978	+				-0.0
1,524,978	+				+0.8
1,524,979	-				-1.3
1,524,999	+				+0.7
1,524,999	+				-0.0
1,524,999	+				+1.9
1,524,999	+				+1.0
1,525,000	-				-0.2
1,525,000	-				+0.1
1,525,000	-				+0.0
1,525,000	-				-1.7
1,525,000	-				-1.4
1,525,000	-				-0.1
1,525,108	+				-0.1
1,525,109	-				+1.8
1,525,109	-				-0.4
1,525,109	-				-0.7
1,525,427	+				-2.8
1,525,427	+				-1.0
1,525,428	-				+0.1
1,525,428	-				+1.7
1,525,428	-				+0.3
1,525,428	-				-0.4
1,525,502	+				+0.3
1,525,507	-				+0.9
1,525,507	-				-0.8
1,526,071	-		Psest_1417	0.49	+0.0
1,526,220	+		Psest_1417	0.76	-1.8
1,526,339	+				-0.1
1,526,340	-				-1.0
1,526,347	+				-0.2
1,526,348	-				-0.7
1,526,429	-				+1.3