Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1327

Experiment: LB 30C timecourse1 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 1
1,428,148	+		Psest_1326	0.55	+1.2
1,428,148	+		Psest_1326	0.55	-0.0
1,428,148	+		Psest_1326	0.55	-0.0
1,428,148	+		Psest_1326	0.55	+0.8
1,428,149	-		Psest_1326	0.56	+0.5
1,428,242	-		Psest_1326	0.66	-0.1
1,428,478	+				-1.3
1,428,571	+				-1.1
1,428,571	+				-0.9
1,428,571	+				-0.5
1,428,571	+				+0.3
1,428,571	+				+0.2
1,428,571	+				+0.4
1,428,571	+				-0.1
1,428,571	+				+0.5
1,428,571	+				+0.8
1,428,571	+				+1.3
1,428,571	+				-0.4
1,428,571	+				+0.4
1,428,571	+				-0.4
1,428,572	-				-0.1
1,428,572	-				+0.8
1,428,572	-				+0.2
1,428,572	-				+1.7
1,428,572	-				-1.1
1,428,572	-				+0.6
1,428,572	-				+0.4
1,428,572	-				+0.7
1,428,572	-				+0.3
1,428,572	-				+0.7
1,429,022	+		Psest_1327	0.11	-2.5
1,429,022	+		Psest_1327	0.11	-1.0
1,429,312	+		Psest_1327	0.22	-0.3
1,429,312	+		Psest_1327	0.22	-0.6
1,429,312	+		Psest_1327	0.22	-1.1
1,429,313	-		Psest_1327	0.22	+0.1
1,429,446	-		Psest_1327	0.26	-0.7
1,429,447	+		Psest_1327	0.26	-0.1
1,429,447	+		Psest_1327	0.26	-1.1
1,429,447	+		Psest_1327	0.26	-1.0
1,429,447	+		Psest_1327	0.26	-1.4
1,429,447	+		Psest_1327	0.26	+0.3
1,429,447	+		Psest_1327	0.26	-1.3
1,429,447	+		Psest_1327	0.26	-0.3
1,429,447	+		Psest_1327	0.26	-1.4
1,429,448	-		Psest_1327	0.26	-0.1
1,429,448	-		Psest_1327	0.26	-0.5
1,429,448	-		Psest_1327	0.26	-0.8
1,429,448	-		Psest_1327	0.26	-1.5
1,429,448	-		Psest_1327	0.26	-0.1
1,429,448	-		Psest_1327	0.26	-2.6
1,429,448	-		Psest_1327	0.26	-0.8
1,429,448	-		Psest_1327	0.26	-1.0
1,429,448	-		Psest_1327	0.26	-1.5
1,429,448	-		Psest_1327	0.26	-0.7
1,429,448	-		Psest_1327	0.26	-0.3
1,429,448	-		Psest_1327	0.26	-0.9
1,429,448	-		Psest_1327	0.26	-0.3
1,429,448	-		Psest_1327	0.26	-1.0
1,429,448	-		Psest_1327	0.26	+0.4
1,429,612	+		Psest_1327	0.32	-0.9
1,429,694	+		Psest_1327	0.35	-1.7
1,429,695	-		Psest_1327	0.35	-0.8
1,429,723	+		Psest_1327	0.36	-1.4
1,429,763	-		Psest_1327	0.37	-0.4
1,429,861	-		Psest_1327	0.41	-1.7
1,429,920	+		Psest_1327	0.43	-0.6
1,429,951	+		Psest_1327	0.44	+0.2
1,429,951	+		Psest_1327	0.44	-1.4
1,430,079	+		Psest_1327	0.48	+1.6
1,430,079	+		Psest_1327	0.48	+0.3
1,430,079	+		Psest_1327	0.48	+0.7
1,430,080	-		Psest_1327	0.48	-2.0
1,430,080	-		Psest_1327	0.48	-1.1
1,430,509	+		Psest_1327	0.64	-0.8
1,430,509	+		Psest_1327	0.64	-0.2
1,430,668	+		Psest_1327	0.69	-1.4
1,430,668	+		Psest_1327	0.69	-0.1
1,430,668	+		Psest_1327	0.69	+0.7
1,430,669	-		Psest_1327	0.69	-0.0
1,430,669	-		Psest_1327	0.69	+1.1
1,430,777	+		Psest_1327	0.73	-1.0
1,430,777	+		Psest_1327	0.73	-0.6
1,431,161	-		Psest_1327	0.86	-1.5
1,431,295	+				-0.5
1,431,535	+				-0.0
1,431,535	+				-0.1
1,431,535	+				-2.3
1,431,535	+				-1.2
1,431,535	+				+0.1
1,431,535	+				-1.5
1,431,536	-				-2.7
1,431,536	-				-0.6
1,431,536	-				-0.3
1,431,639	-				+1.9
1,431,639	-				-0.3
1,431,682	+				-1.0
1,431,685	-				-0.8
1,431,685	-				-0.7
1,431,726	-				-1.2
1,431,726	-				+0.7
1,432,151	+		Psest_1329	0.25	-1.4
1,432,151	+		Psest_1329	0.25	-0.3
1,432,151	+		Psest_1329	0.25	+0.4
1,432,151	+		Psest_1329	0.25	+0.2
1,432,152	-		Psest_1329	0.25	+0.3
1,432,152	-		Psest_1329	0.25	+0.5
1,432,152	-		Psest_1329	0.25	-0.1
1,432,152	-		Psest_1329	0.25	-2.0
1,432,152	-		Psest_1329	0.25	+0.3
1,432,152	-		Psest_1329	0.25	-1.0
1,432,152	-		Psest_1329	0.25	-1.7
1,432,152	-		Psest_1329	0.25	-0.2
1,432,152	-		Psest_1329	0.25	+1.2
1,432,217	+		Psest_1329	0.35	+0.8
1,432,477	-		Psest_1329	0.78	+0.3
1,432,477	-		Psest_1329	0.78	-0.8
1,432,477	-		Psest_1329	0.78	+1.2