Strain Fitness in Shewanella oneidensis MR-1 around SO1200

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 1,243,412 to 1,246,194
download SVG
500 ntglmM and tpiA are separated by 193 nucleotidestpiA and secG are separated by 1 nucleotidessecG and tRNA-Leu-7 are separated by 9 nucleotidestRNA-Leu-7 and tRNA-Met-6 are separated by 83 nucleotidestRNA-Met-6 and SO1202 are separated by 168 nucleotides SO1199: glmM - phosphoglucosamine mutase (NCBI ptt file), at 1,242,881 to 1,244,218 glmM SO1200: tpiA - triosephosphate isomerase (NCBI ptt file), at 1,244,412 to 1,245,194 tpiA SO1201: secG - preprotein translocase, SecG subunit (NCBI ptt file), at 1,245,196 to 1,245,531 secG SO_t021: tRNA-Leu-7 - tRNA-Leu (RefSeq), at 1,245,541 to 1,245,627 tRNA-Leu-7 SO_t022: tRNA-Met-6 - tRNA-Met (RefSeq), at 1,245,711 to 1,245,787 tRNA-Met-6 SO1202: SO1202 - conserved hypothetical protein (NCBI ptt file), at 1,245,956 to 1,246,411 SO1202