Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13740

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
1,417,576	+				-0.0
1,417,619	-				-1.2
1,417,655	-		PGA1_c13730	0.11	-0.9
1,417,666	+		PGA1_c13730	0.12	+0.0
1,417,666	+		PGA1_c13730	0.12	+0.5
1,417,666	+		PGA1_c13730	0.12	+0.5
1,417,739	-		PGA1_c13730	0.20	+0.7
1,417,798	+		PGA1_c13730	0.25	+0.2
1,417,813	+		PGA1_c13730	0.27	-0.1
1,417,834	+		PGA1_c13730	0.29	-0.5
1,417,894	+		PGA1_c13730	0.35	+0.4
1,417,894	+		PGA1_c13730	0.35	-0.4
1,417,899	+		PGA1_c13730	0.35	+0.7
1,417,902	-		PGA1_c13730	0.36	-0.6
1,417,902	-		PGA1_c13730	0.36	+0.2
1,417,902	-		PGA1_c13730	0.36	-0.2
1,417,902	-		PGA1_c13730	0.36	-0.7
1,417,907	-		PGA1_c13730	0.36	+0.4
1,417,924	+		PGA1_c13730	0.38	+0.4
1,417,929	+		PGA1_c13730	0.38	-0.9
1,417,929	+		PGA1_c13730	0.38	-0.5
1,417,937	-		PGA1_c13730	0.39	+0.3
1,417,943	+		PGA1_c13730	0.40	+0.7
1,417,947	-		PGA1_c13730	0.40	+0.6
1,417,948	-		PGA1_c13730	0.40	-1.0
1,417,968	-		PGA1_c13730	0.42	+0.4
1,418,008	+		PGA1_c13730	0.46	+0.8
1,418,008	+		PGA1_c13730	0.46	+0.1
1,418,013	+		PGA1_c13730	0.47	+1.1
1,418,016	-		PGA1_c13730	0.47	+0.2
1,418,023	+		PGA1_c13730	0.47	+1.3
1,418,023	+		PGA1_c13730	0.47	+0.4
1,418,023	+		PGA1_c13730	0.47	+0.1
1,418,045	-		PGA1_c13730	0.50	-0.6
1,418,120	+		PGA1_c13730	0.57	-0.2
1,418,220	-		PGA1_c13730	0.67	-2.2
1,418,245	-		PGA1_c13730	0.69	+0.6
1,418,245	-		PGA1_c13730	0.69	-0.2
1,418,349	+		PGA1_c13730	0.80	-0.5
1,418,374	-		PGA1_c13730	0.82	-0.8
1,418,450	-		PGA1_c13730	0.89	+0.1
1,418,455	-				+1.1
1,418,455	-				+0.2
1,418,540	+				+0.7
1,418,551	+				+1.0
1,418,591	+				+0.0
1,418,618	+				+0.4
1,418,624	-				-0.7
1,418,629	-				+0.1
1,418,636	-				-0.3
1,418,636	-				-0.8
1,418,665	+				+0.2
1,418,686	+				+0.8
1,418,776	-		PGA1_c13740	0.14	+0.8
1,418,848	+		PGA1_c13740	0.19	+0.1
1,418,938	-		PGA1_c13740	0.24	-1.1
1,418,991	+		PGA1_c13740	0.28	-0.2
1,418,991	+		PGA1_c13740	0.28	-0.5
1,418,991	+		PGA1_c13740	0.28	-1.2
1,418,999	-		PGA1_c13740	0.28	-1.4
1,419,014	+		PGA1_c13740	0.29	-1.1
1,419,040	+		PGA1_c13740	0.31	+0.4
1,419,067	+		PGA1_c13740	0.33	+0.2
1,419,075	-		PGA1_c13740	0.33	-1.3
1,419,075	-		PGA1_c13740	0.33	-0.7
1,419,108	-		PGA1_c13740	0.35	+0.1
1,419,165	-		PGA1_c13740	0.39	-0.2
1,419,177	+		PGA1_c13740	0.39	-0.6
1,419,197	-		PGA1_c13740	0.41	-0.2
1,419,222	-		PGA1_c13740	0.42	-0.3
1,419,246	+		PGA1_c13740	0.44	-0.3
1,419,254	-		PGA1_c13740	0.44	+1.1
1,419,387	-		PGA1_c13740	0.52	+0.1
1,419,407	+		PGA1_c13740	0.54	-1.1
1,419,420	+		PGA1_c13740	0.55	-0.7
1,419,449	+		PGA1_c13740	0.56	-0.3
1,419,452	-		PGA1_c13740	0.57	-0.1
1,419,477	-		PGA1_c13740	0.58	-1.7
1,419,492	+		PGA1_c13740	0.59	-0.3
1,419,492	+		PGA1_c13740	0.59	+0.4
1,419,495	-		PGA1_c13740	0.59	+0.1
1,419,500	-		PGA1_c13740	0.60	+0.7
1,419,501	-		PGA1_c13740	0.60	-0.1
1,419,532	+		PGA1_c13740	0.62	+0.0
1,419,642	-		PGA1_c13740	0.68	+0.7
1,419,653	-		PGA1_c13740	0.69	-1.1
1,419,704	+		PGA1_c13740	0.72	+1.1
1,419,710	-		PGA1_c13740	0.73	-0.6
1,419,717	-		PGA1_c13740	0.73	+0.4
1,419,768	+		PGA1_c13740	0.76	-1.3
1,419,776	-		PGA1_c13740	0.77	-0.1
1,419,807	+		PGA1_c13740	0.79	-0.1
1,419,815	-		PGA1_c13740	0.79	+0.3
1,419,815	-		PGA1_c13740	0.79	+0.8
1,419,817	+		PGA1_c13740	0.79	+0.2
1,419,839	+		PGA1_c13740	0.81	+0.5
1,419,908	+		PGA1_c13740	0.85	+0.1
1,419,908	+		PGA1_c13740	0.85	+0.3
1,419,908	+		PGA1_c13740	0.85	-0.1
1,419,908	+		PGA1_c13740	0.85	-0.7
1,419,908	+		PGA1_c13740	0.85	-0.8
1,419,908	+		PGA1_c13740	0.85	-1.0
1,419,908	+		PGA1_c13740	0.85	-0.2
1,419,908	+		PGA1_c13740	0.85	-0.8
1,419,916	-		PGA1_c13740	0.86	-0.7
1,419,916	-		PGA1_c13740	0.86	+0.0
1,419,916	-		PGA1_c13740	0.86	-0.0
1,419,916	-		PGA1_c13740	0.86	+0.7
1,419,916	-		PGA1_c13740	0.86	+0.2
1,419,916	-		PGA1_c13740	0.86	+0.4
1,419,916	-		PGA1_c13740	0.86	-1.1
1,419,916	-		PGA1_c13740	0.86	-0.6
1,419,916	-		PGA1_c13740	0.86	-0.6
1,419,916	-		PGA1_c13740	0.86	-0.7
1,419,916	-		PGA1_c13740	0.86	+0.2
1,419,916	-		PGA1_c13740	0.86	-1.6
1,419,916	-		PGA1_c13740	0.86	+0.1
1,419,918	+		PGA1_c13740	0.86	+0.5
1,419,926	-		PGA1_c13740	0.86	+1.1
1,419,926	-		PGA1_c13740	0.86	+0.4
1,419,926	-		PGA1_c13740	0.86	-0.3
1,419,926	-		PGA1_c13740	0.86	+0.8
1,419,926	-		PGA1_c13740	0.86	-0.7
1,419,926	-		PGA1_c13740	0.86	+0.1
1,419,926	-		PGA1_c13740	0.86	-0.1
1,420,007	-				-0.2
1,420,019	+				-0.6
1,420,134	-				+0.4
1,420,136	+				+0.3
1,420,138	-				+0.1
1,420,142	+				-2.2
1,420,152	+				+0.4
1,420,152	+				+0.2
1,420,152	+				+0.2
1,420,152	+				+1.7
1,420,152	+				-0.3
1,420,160	-				-0.1
1,420,165	-				+0.6
1,420,182	-				-0.3
1,420,182	-				-0.2
1,420,201	+				-0.6
1,420,201	+				-0.1
1,420,259	+		PGA1_c13750	0.28	+1.6
1,420,259	+		PGA1_c13750	0.28	+0.1
1,420,267	-		PGA1_c13750	0.31	+0.8
1,420,315	+		PGA1_c13750	0.50	+0.7
1,420,315	+		PGA1_c13750	0.50	-0.2
1,420,315	+		PGA1_c13750	0.50	+0.1
1,420,323	-		PGA1_c13750	0.53	+1.0
1,420,374	-		PGA1_c13750	0.72	-0.2
1,420,420	-		PGA1_c13750	0.89	-0.1
1,420,475	+				-0.6
1,420,475	+				+0.9
1,420,483	-				-0.2
1,420,483	-				-0.7
1,420,483	-				+0.9
1,420,522	+				-0.8
1,420,566	-				-0.8
1,420,582	+				-0.8
1,420,590	-				+0.6
1,420,620	+		PGA1_c13760	0.11	-0.3
1,420,620	+		PGA1_c13760	0.11	-0.0
1,420,620	+		PGA1_c13760	0.11	-0.3
1,420,628	-		PGA1_c13760	0.11	+0.1
1,420,628	-		PGA1_c13760	0.11	+0.9
1,420,628	-		PGA1_c13760	0.11	+0.2
1,420,674	-		PGA1_c13760	0.14	+0.2
1,420,686	+		PGA1_c13760	0.15	-0.4
1,420,686	-		PGA1_c13760	0.15	-1.5
1,420,715	+		PGA1_c13760	0.17	-0.1
1,420,717	-		PGA1_c13760	0.17	-0.2
1,420,773	-		PGA1_c13760	0.20	-0.2
1,420,781	+		PGA1_c13760	0.21	+1.2
1,420,781	+		PGA1_c13760	0.21	-0.1
1,420,781	-		PGA1_c13760	0.21	-0.5
1,420,782	+		PGA1_c13760	0.21	+0.1
1,420,791	+		PGA1_c13760	0.22	+0.3
1,420,792	-		PGA1_c13760	0.22	+0.1
1,420,829	-		PGA1_c13760	0.24	+1.4
1,420,867	+		PGA1_c13760	0.26	-1.6
1,420,893	+		PGA1_c13760	0.28	-0.7
1,420,918	-		PGA1_c13760	0.30	+0.1
1,420,941	-		PGA1_c13760	0.31	+0.7
1,420,964	+		PGA1_c13760	0.32	-0.7
1,420,972	-		PGA1_c13760	0.33	-0.3
1,420,972	-		PGA1_c13760	0.33	-0.5
1,420,974	+		PGA1_c13760	0.33	+0.3
1,420,974	+		PGA1_c13760	0.33	-0.5
1,420,974	+		PGA1_c13760	0.33	-0.5
1,420,982	-		PGA1_c13760	0.34	-0.3
1,420,982	-		PGA1_c13760	0.34	+0.5
1,420,982	-		PGA1_c13760	0.34	-0.4
1,420,982	-		PGA1_c13760	0.34	+0.0
1,420,982	-		PGA1_c13760	0.34	+0.3
1,420,982	-				+1.6
1,420,982	-		PGA1_c13760	0.34	-2.1
1,420,982	-		PGA1_c13760	0.34	+0.3
1,420,982	-		PGA1_c13760	0.34	-0.4
1,420,988	+		PGA1_c13760	0.34	+0.5
1,421,024	+		PGA1_c13760	0.36	+0.4
1,421,024	+		PGA1_c13760	0.36	-0.9
1,421,024	+		PGA1_c13760	0.36	+0.6
1,421,024	+		PGA1_c13760	0.36	+0.1
1,421,024	+		PGA1_c13760	0.36	-0.1
1,421,024	+		PGA1_c13760	0.36	-0.3
1,421,024	+		PGA1_c13760	0.36	+0.3
1,421,024	+		PGA1_c13760	0.36	+0.4
1,421,024	+		PGA1_c13760	0.36	-0.1
1,421,024	+		PGA1_c13760	0.36	+0.9
1,421,024	+		PGA1_c13760	0.36	+0.7
1,421,024	+		PGA1_c13760	0.36	-0.2
1,421,032	-		PGA1_c13760	0.37	+0.5
1,421,032	-		PGA1_c13760	0.37	+0.5
1,421,032	-		PGA1_c13760	0.37	+0.1
1,421,032	-		PGA1_c13760	0.37	+0.3
1,421,032	-		PGA1_c13760	0.37	+0.0
1,421,032	-		PGA1_c13760	0.37	-0.3
1,421,032	-		PGA1_c13760	0.37	-0.3
1,421,034	+		PGA1_c13760	0.37	-0.1
1,421,042	-		PGA1_c13760	0.37	+0.2
1,421,087	+		PGA1_c13760	0.40	+0.4
1,421,095	-		PGA1_c13760	0.41	-0.1
1,421,095	-		PGA1_c13760	0.41	+0.9
1,421,136	+		PGA1_c13760	0.43	-1.6
1,421,146	+		PGA1_c13760	0.44	-0.2
1,421,146	+		PGA1_c13760	0.44	-0.2