Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3349

Experiment: LB 26C sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 26C sample1
3,516,261	-				+0.5
3,516,261	-				-1.0
3,516,261	-				-0.0
3,516,261	-				-1.7
3,516,261	-				+0.4
3,516,261	-				+0.8
3,516,261	-				+0.1
3,516,425	-				-0.2
3,516,443	+				-1.2
3,516,443	+				-1.0
3,516,443	+				+0.8
3,516,443	+				+1.0
3,516,443	+				+0.7
3,516,443	+				-0.1
3,516,443	+				+0.7
3,516,443	+				+0.9
3,516,443	+				-0.5
3,516,443	+				+0.0
3,516,443	+				-0.6
3,516,444	-				-0.7
3,516,444	-				+1.0
3,516,444	-				-1.4
3,516,444	-				+1.4
3,516,444	-				+1.9
3,516,444	-				+1.0
3,516,444	-				-0.1
3,516,444	-				+0.0
3,516,444	-				+1.0
3,516,444	-				-0.2
3,516,444	-				+2.6
3,516,444	-				+0.5
3,516,444	-				+0.1
3,516,444	-				-1.2
3,516,444	-				+0.4
3,516,486	-				-0.4
3,516,588	+				+0.8
3,516,588	+				-0.2
3,516,588	+				-0.9
3,516,589	-				-0.4
3,516,589	-				+1.4
3,516,589	-				+0.0
3,516,747	+		Psest_3348	0.24	-1.2
3,516,747	+		Psest_3348	0.24	-1.7
3,516,840	-		Psest_3348	0.38	+0.1
3,516,840	-		Psest_3348	0.38	-1.7
3,516,863	+		Psest_3348	0.41	-1.4
3,516,960	-		Psest_3348	0.56	+0.4
3,516,960	-		Psest_3348	0.56	-1.0
3,516,992	+		Psest_3348	0.60	+0.2
3,516,992	+		Psest_3348	0.60	+0.5
3,516,992	+		Psest_3348	0.60	-1.2
3,516,992	+		Psest_3348	0.60	+0.4
3,516,992	+		Psest_3348	0.60	-1.1
3,516,992	+		Psest_3348	0.60	+0.7
3,516,992	+		Psest_3348	0.60	-1.2
3,516,992	+		Psest_3348	0.60	+0.8
3,516,993	-		Psest_3348	0.60	+1.0
3,516,993	-		Psest_3348	0.60	+2.2
3,516,993	-		Psest_3348	0.60	-1.7
3,516,993	-		Psest_3348	0.60	-0.0
3,516,993	-		Psest_3348	0.60	-0.4
3,517,226	+				-0.6
3,517,226	+				+0.1
3,517,226	+				+1.4
3,517,227	-				-1.2
3,517,227	-				-0.9
3,517,227	-				-0.7
3,517,547	+		Psest_3349	0.38	+1.1
3,517,547	+		Psest_3349	0.38	-1.9
3,517,548	-		Psest_3349	0.38	+1.0
3,517,548	-		Psest_3349	0.38	+0.5
3,517,548	-		Psest_3349	0.38	-1.2
3,517,603	+		Psest_3349	0.46	-0.8
3,517,603	+		Psest_3349	0.46	+0.9
3,517,603	+		Psest_3349	0.46	+0.4
3,517,603	+		Psest_3349	0.46	+1.3
3,517,603	+		Psest_3349	0.46	+1.1
3,517,603	+		Psest_3349	0.46	+0.8
3,517,603	+		Psest_3349	0.46	+0.5
3,517,603	+		Psest_3349	0.46	-0.4
3,517,603	+		Psest_3349	0.46	+0.6
3,517,603	+		Psest_3349	0.46	+1.1
3,517,603	+		Psest_3349	0.46	+0.8
3,517,603	+		Psest_3349	0.46	+0.6
3,517,603	+		Psest_3349	0.46	-0.6
3,517,603	+		Psest_3349	0.46	+0.4
3,517,603	+		Psest_3349	0.46	+0.3
3,517,603	+		Psest_3349	0.46	+1.0
3,517,604	-		Psest_3349	0.46	-1.7
3,517,604	-		Psest_3349	0.46	+0.5
3,517,604	-		Psest_3349	0.46	+1.2
3,517,604	-		Psest_3349	0.46	+1.5
3,517,604	-		Psest_3349	0.46	-0.4
3,517,604	-		Psest_3349	0.46	-0.4
3,517,604	-		Psest_3349	0.46	-1.4
3,517,760	+		Psest_3349	0.67	-1.2
3,517,760	+		Psest_3349	0.67	-0.3
3,517,761	-		Psest_3349	0.67	-0.4
3,517,780	+		Psest_3349	0.69	+0.9
3,517,780	+		Psest_3349	0.69	+1.3
3,518,061	-				-0.4
3,518,067	+				-2.0
3,518,068	-				+1.0
3,518,068	-				-0.6
3,518,073	+				-0.2
3,518,073	+				+0.9
3,518,073	+				+0.0
3,518,073	+				+0.4
3,518,074	-				+0.1
3,518,074	-				-1.1
3,518,074	-				-0.1
3,518,074	-				+0.7
3,518,074	-				+0.5
3,518,074	-				-1.6
3,518,074	-				+4.0
3,518,074	-				+0.5
3,518,074	-				-0.4
3,518,074	-				-0.2
3,518,074	-				-1.7
3,518,074	-				-0.6
3,518,074	-				-0.3
3,518,074	-				+0.6
3,518,074	-				-1.0
3,518,074	-				-3.0
3,518,076	+				+0.0
3,518,076	+				+0.6
3,518,077	-				+1.1
3,518,077	-				+0.1
3,518,118	+				-1.7
3,518,118	+				+0.2
3,518,119	-				+1.1
3,518,130	+				+0.4
3,518,131	-				+0.2
3,518,190	+		Psest_3350	0.11	-2.2
3,518,191	-		Psest_3350	0.11	-0.5
3,518,191	-		Psest_3350	0.11	+1.0
3,518,196	+		Psest_3350	0.11	+0.3
3,518,196	+		Psest_3350	0.11	-0.3
3,518,196	+		Psest_3350	0.11	+0.0
3,518,196	+		Psest_3350	0.11	+1.8
3,518,196	+		Psest_3350	0.11	-0.5
3,518,196	+		Psest_3350	0.11	-0.1
3,518,196	+		Psest_3350	0.11	+2.2
3,518,196	+		Psest_3350	0.11	+0.2
3,518,197	-		Psest_3350	0.11	+1.1
3,518,197	-		Psest_3350	0.11	+0.2
3,518,197	-		Psest_3350	0.11	-0.7
3,518,197	-		Psest_3350	0.11	-0.7
3,518,197	-		Psest_3350	0.11	+1.0
3,518,197	-		Psest_3350	0.11	+0.9
3,518,197	-		Psest_3350	0.11	+1.1
3,518,205	+		Psest_3350	0.12	-0.9
3,518,206	-		Psest_3350	0.12	-0.9
3,518,206	-		Psest_3350	0.12	+1.1
3,518,206	-		Psest_3350	0.12	+0.2
3,518,206	-		Psest_3350	0.12	-0.3
3,518,206	-		Psest_3350	0.12	+0.8
3,518,206	-		Psest_3350	0.12	+0.1
3,518,277	+		Psest_3350	0.18	+1.0
3,518,344	-		Psest_3350	0.24	-0.2
3,518,344	-		Psest_3350	0.24	-0.0
3,518,344	-		Psest_3350	0.24	+0.0
3,518,344	-		Psest_3350	0.24	-0.6
3,518,344	-		Psest_3350	0.24	+1.1
3,518,344	-		Psest_3350	0.24	-0.5
3,518,535	+		Psest_3350	0.40	-1.2
3,518,535	+		Psest_3350	0.40	+0.2
3,518,535	+		Psest_3350	0.40	+0.6
3,518,535	+		Psest_3350	0.40	-0.3
3,518,535	+		Psest_3350	0.40	+1.8
3,518,535	+		Psest_3350	0.40	+2.0
3,518,535	+		Psest_3350	0.40	+1.2
3,518,535	+		Psest_3350	0.40	-0.5
3,518,535	+		Psest_3350	0.40	+0.6
3,518,535	+		Psest_3350	0.40	-1.7
3,518,535	+		Psest_3350	0.40	+1.2
3,518,536	-		Psest_3350	0.40	-0.9
3,518,536	-		Psest_3350	0.40	-1.6
3,518,536	-		Psest_3350	0.40	-0.4
3,518,536	-		Psest_3350	0.40	+1.0
3,518,536	-		Psest_3350	0.40	-0.7
3,518,536	-		Psest_3350	0.40	-0.2
3,518,536	-		Psest_3350	0.40	+0.1
3,518,536	-		Psest_3350	0.40	-0.9
3,518,536	-		Psest_3350	0.40	-0.1
3,518,536	-		Psest_3350	0.40	+0.7
3,518,811	+		Psest_3350	0.64	-0.5
3,518,811	+		Psest_3350	0.64	-0.2
3,518,812	-		Psest_3350	0.64	+0.4
3,518,812	-		Psest_3350	0.64	+1.6
3,518,812	-		Psest_3350	0.64	+1.7
3,518,988	+		Psest_3350	0.79	+0.4
3,518,989	-		Psest_3350	0.79	-0.9
3,518,989	-		Psest_3350	0.79	+1.0
3,518,989	-		Psest_3350	0.79	+0.4