Strain Fitness in Shewanella amazonensis SB2B around Sama_3623

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
4,261,629	-		Sama_3621	0.55	+0.3
4,261,678	+		Sama_3621	0.60	-1.8
4,261,678	+		Sama_3621	0.60	+0.5
4,261,679	-		Sama_3621	0.60	-0.4
4,261,682	+		Sama_3621	0.60	+1.5
4,261,682	+		Sama_3621	0.60	+0.8
4,261,682	+		Sama_3621	0.60	+0.1
4,261,682	+		Sama_3621	0.60	+0.1
4,261,682	+		Sama_3621	0.60	+0.0
4,261,682	+		Sama_3621	0.60	+1.6
4,261,683	-		Sama_3621	0.60	-0.7
4,261,701	+		Sama_3621	0.62	+2.6
4,261,701	+		Sama_3621	0.62	-0.4
4,261,701	+		Sama_3621	0.62	+1.5
4,261,701	+		Sama_3621	0.62	-1.2
4,261,701	+		Sama_3621	0.62	-0.7
4,261,701	+		Sama_3621	0.62	+0.3
4,261,701	+		Sama_3621	0.62	+0.6
4,261,701	+		Sama_3621	0.62	+2.2
4,261,701	+		Sama_3621	0.62	+1.3
4,261,701	+		Sama_3621	0.62	-0.8
4,261,701	+		Sama_3621	0.62	-0.5
4,261,702	-		Sama_3621	0.62	+0.3
4,261,702	-		Sama_3621	0.62	-0.5
4,261,702	-		Sama_3621	0.62	-0.8
4,261,702	-		Sama_3621	0.62	-1.4
4,261,702	-		Sama_3621	0.62	+0.9
4,261,702	-		Sama_3621	0.62	-1.8
4,261,702	-		Sama_3621	0.62	+0.7
4,261,717	-		Sama_3621	0.64	-3.2
4,261,768	+		Sama_3621	0.69	+1.0
4,261,768	+		Sama_3621	0.69	-2.0
4,261,768	+		Sama_3621	0.69	+0.2
4,261,768	+		Sama_3621	0.69	-0.4
4,261,768	+		Sama_3621	0.69	+0.6
4,261,769	-		Sama_3621	0.69	+0.8
4,261,769	-		Sama_3621	0.69	-0.6
4,261,769	-		Sama_3621	0.69	+0.2
4,261,769	-		Sama_3621	0.69	-2.8
4,261,769	-		Sama_3621	0.69	+0.2
4,261,769	-		Sama_3621	0.69	+1.1
4,261,769	-		Sama_3621	0.69	+0.8
4,261,769	-		Sama_3621	0.69	-2.1
4,261,769	-		Sama_3621	0.69	+0.0
4,261,773	+		Sama_3621	0.70	+0.6
4,261,815	-		Sama_3621	0.74	-0.4
4,261,834	+		Sama_3621	0.76	-1.4
4,261,834	+		Sama_3621	0.76	-0.6
4,261,834	+		Sama_3621	0.76	-0.5
4,261,834	+		Sama_3621	0.76	-0.5
4,261,835	-		Sama_3621	0.76	-1.4
4,261,835	-		Sama_3621	0.76	-0.3
4,261,835	-		Sama_3621	0.76	+0.0
4,261,835	-		Sama_3621	0.76	-1.2
4,261,835	-		Sama_3621	0.76	-0.2
4,261,835	-		Sama_3621	0.76	+0.3
4,261,909	+		Sama_3621	0.84	+0.1
4,261,909	+		Sama_3621	0.84	-0.8
4,261,909	+		Sama_3621	0.84	-1.6
4,261,910	-		Sama_3621	0.84	+0.6
4,261,910	-		Sama_3621	0.84	-1.0
4,262,010	-				-0.3
4,262,042	+				-0.1
4,262,043	-				-1.7
4,262,043	-				+0.2
4,262,084	+				+0.7
4,262,084	+				+0.0
4,262,090	+				+0.1
4,262,091	-				+1.6
4,262,116	+				+1.0
4,262,116	+				+0.7
4,262,116	+				-1.8
4,262,117	-				+1.3
4,262,117	-				-1.2
4,262,120	-				+0.3
4,262,168	+		Sama_3622	0.21	+0.8
4,262,168	+		Sama_3622	0.21	+2.0
4,262,169	-		Sama_3622	0.21	+1.0
4,262,209	+		Sama_3622	0.31	-1.0
4,262,358	+		Sama_3622	0.68	+1.8
4,262,358	+		Sama_3622	0.68	+2.7
4,262,358	+		Sama_3622	0.68	+0.8
4,262,359	-		Sama_3622	0.69	-0.1
4,262,359	-		Sama_3622	0.69	+1.3
4,262,360	+		Sama_3622	0.69	+1.5
4,262,360	+		Sama_3622	0.69	-1.0
4,262,360	+		Sama_3622	0.69	-0.6
4,262,361	-		Sama_3622	0.69	-0.7
4,262,361	-		Sama_3622	0.69	-0.2
4,262,361	-		Sama_3622	0.69	+2.4
4,262,361	-		Sama_3622	0.69	-0.4
4,262,361	-		Sama_3622	0.69	+0.5
4,262,361	-		Sama_3622	0.69	+1.4
4,262,371	+		Sama_3622	0.72	+0.7
4,262,390	+		Sama_3622	0.76	+0.1
4,262,390	+		Sama_3622	0.76	+2.1
4,262,390	+		Sama_3622	0.76	+2.3
4,262,391	-		Sama_3622	0.77	+3.4
4,262,391	-		Sama_3622	0.77	+0.9
4,262,393	+		Sama_3622	0.77	-2.0
4,262,393	+		Sama_3622	0.77	+0.4
4,262,393	+		Sama_3622	0.77	+1.0
4,262,393	+		Sama_3622	0.77	+2.9
4,262,393	+		Sama_3622	0.77	+1.0
4,262,393	+		Sama_3622	0.77	+0.9
4,262,393	+		Sama_3622	0.77	-0.3
4,262,393	+		Sama_3622	0.77	+1.2
4,262,394	-		Sama_3622	0.77	+0.4
4,262,394	-		Sama_3622	0.77	+0.1
4,262,394	-		Sama_3622	0.77	-0.6
4,262,394	-		Sama_3622	0.77	+1.2
4,262,399	+		Sama_3622	0.79	-1.0
4,262,399	+		Sama_3622	0.79	+0.0
4,262,399	+		Sama_3622	0.79	+0.5
4,262,399	+		Sama_3622	0.79	+1.0
4,262,399	+		Sama_3622	0.79	-1.1
4,262,399	+		Sama_3622	0.79	+0.8
4,262,400	-		Sama_3622	0.79	+0.8
4,262,400	-		Sama_3622	0.79	-0.7
4,262,400	-		Sama_3622	0.79	+0.1
4,262,400	-		Sama_3622	0.79	+0.4
4,262,400	-		Sama_3622	0.79	+1.2
4,262,400	-		Sama_3622	0.79	+1.8
4,262,400	-		Sama_3622	0.79	+1.2
4,262,400	-		Sama_3622	0.79	+1.1
4,262,400	-		Sama_3622	0.79	+1.2
4,262,439	+		Sama_3622	0.89	+0.3
4,262,439	+		Sama_3622	0.89	-0.1
4,262,461	+				+1.3
4,262,461	+				+0.6
4,262,462	-				+2.8
4,262,473	+				+1.5
4,262,473	+				+0.1
4,262,473	+				+1.6
4,262,473	+				+1.1
4,262,473	+				+1.8
4,262,474	-				+0.6
4,262,474	-				+0.6
4,262,474	-				+2.2
4,262,477	+				-0.6
4,262,477	+				-0.8
4,262,477	+				-0.2
4,262,477	+				+1.5
4,262,477	+				+1.5
4,262,477	+				+1.4
4,262,477	+				+1.1
4,262,478	-				+1.1
4,262,478	-				+0.4
4,262,478	-				+0.7
4,262,478	-				-1.0
4,262,478	-				+0.3
4,262,478	-				-1.6
4,262,478	-				+1.7
4,262,478	-				+0.6
4,262,478	-				+0.4
4,262,511	+				+0.8
4,262,511	+				+0.4
4,262,511	+				+0.4
4,262,511	+				+1.2
4,262,511	+				-1.2
4,262,512	-				-0.5
4,262,531	-				-0.2
4,262,553	+				+0.2
4,262,553	+				-0.5
4,262,553	+				-2.6
4,262,553	+				+0.8
4,262,553	+				-3.2
4,262,553	+				-0.3
4,262,553	+				+1.2
4,262,554	-				+2.1
4,262,554	-				+1.6
4,262,554	-				+1.8
4,262,554	-				+1.1
4,262,554	-				+1.8
4,262,569	+				-0.6
4,262,570	-				+1.3
4,262,577	+				+0.7
4,262,577	+				+0.2
4,262,578	-				-0.4
4,262,582	+				+1.2
4,262,583	-				+0.9
4,262,583	-				+2.4
4,262,583	-				+2.3
4,262,622	+				+2.4
4,262,622	+				+1.4
4,262,623	-				+1.5
4,262,643	+				+1.7
4,262,696	-		Sama_3623	0.18	+2.5
4,262,725	+		Sama_3623	0.23	+2.2
4,262,725	+		Sama_3623	0.23	+1.1
4,262,725	+		Sama_3623	0.23	+1.7
4,262,726	-		Sama_3623	0.23	+1.6
4,262,726	-		Sama_3623	0.23	-0.4
4,262,759	-		Sama_3623	0.29	+1.9
4,262,803	+		Sama_3623	0.37	+2.0
4,262,804	-		Sama_3623	0.37	+0.8
4,262,804	-		Sama_3623	0.37	+1.5
4,262,804	-		Sama_3623	0.37	+1.7
4,262,810	+		Sama_3623	0.38	+1.9
4,262,810	+		Sama_3623	0.38	+1.2
4,262,810	+		Sama_3623	0.38	-1.3
4,262,811	-		Sama_3623	0.38	+1.9
4,262,811	-		Sama_3623	0.38	+1.4
4,262,834	+		Sama_3623	0.42	+1.5
4,262,834	+		Sama_3623	0.42	+0.6
4,262,835	-		Sama_3623	0.43	+1.2
4,262,835	-		Sama_3623	0.43	+1.8
4,262,912	-		Sama_3623	0.56	+2.4
4,262,912	-		Sama_3623	0.56	+1.4
4,263,075	+		Sama_3623	0.85	+1.0
4,263,115	+				+1.8
4,263,115	+				+1.4
4,263,115	+				+2.6
4,263,115	+				+2.4
4,263,115	+				+1.4
4,263,138	+				+1.7
4,263,138	+				+1.6
4,263,138	+				+0.3
4,263,138	+				+0.3
4,263,138	+				+1.1
4,263,138	+				+2.7
4,263,138	+				+0.8
4,263,138	+				+0.1
4,263,138	+				+3.0
4,263,138	+				+1.2
4,263,138	+				+0.7
4,263,138	+				+1.6
4,263,138	+				+1.9
4,263,138	+				-1.8
4,263,138	+				-0.4
4,263,138	+				+2.5
4,263,139	-				+0.7
4,263,139	-				+0.2
4,263,139	-				+2.6
4,263,139	-				+1.4
4,263,139	-				+2.6
4,263,139	-				+1.8
4,263,139	-				+2.3
4,263,139	-				+1.1
4,263,139	-				+1.5
4,263,139	-				+0.9
4,263,139	-				+2.5
4,263,139	-				+0.9
4,263,139	-				+1.5
4,263,139	-				+1.1
4,263,139	-				+2.0
4,263,139	-				-0.4
4,263,139	-				+1.4
4,263,139	-				+0.9
4,263,140	+				-1.5
4,263,141	-				+1.5
4,263,141	-				+0.8
4,263,184	+				-0.3
4,263,284	+				+0.4
4,263,284	+				+1.4
4,263,285	-				-0.4
4,263,306	-				-0.5
4,263,366	+				+0.2
4,263,366	+				+0.4
4,263,366	+				+1.3
4,263,366	+				+0.9
4,263,366	+				+0.5
4,263,366	+				-2.9
4,263,366	+				+0.8
4,263,367	-				+1.4
4,263,367	-				+1.6
4,263,367	-				+0.6
4,263,367	-				-0.8
4,263,367	-				+1.8
4,263,367	-				+0.4
4,263,367	-				+0.1
4,263,384	+				+0.1
4,263,384	+				-1.3
4,263,384	+				+0.7
4,263,384	+				+1.7
4,263,384	+				-1.8
4,263,385	-				+0.2
4,263,385	-				-2.1
4,263,385	-				+0.5
4,263,385	-				+0.9
4,263,385	-				-1.3
4,263,385	-				+0.6
4,263,385	-				+0.0
4,263,385	-				-0.4
4,263,385	-				-0.9
4,263,385	-				+1.4
4,263,385	-				-1.8
4,263,385	-				-0.8
4,263,385	-				+0.1
4,263,385	-				+0.3
4,263,388	+				-1.4
4,263,389	-				-1.0
4,263,389	-				+0.4
4,263,441	+				-0.2
4,263,441	+				-0.3
4,263,441	+				-0.4
4,263,441	+				+0.4
4,263,442	-				-0.3
4,263,442	-				+0.1
4,263,442	-				+0.5
4,263,445	+				-0.8
4,263,445	+				+0.5
4,263,445	+				+0.5
4,263,446	-				+0.4
4,263,446	-				-1.7
4,263,446	-				-1.3
4,263,446	-				-0.7
4,263,446	-				+0.2
4,263,446	-				+0.8
4,263,446	-				-0.3
4,263,446	-				-1.4
4,263,446	-				+0.2
4,263,479	-		Sama_3624	0.10	+0.4
4,263,492	-		Sama_3624	0.11	+0.1
4,263,492	-		Sama_3624	0.11	-0.7
4,263,492	-		Sama_3624	0.11	+1.5
4,263,536	+		Sama_3624	0.12	+1.2
4,263,537	-		Sama_3624	0.12	-1.4
4,263,603	+		Sama_3624	0.15	-1.2
4,263,603	+		Sama_3624	0.15	-0.7
4,263,603	+		Sama_3624	0.15	+1.0
4,263,603	+		Sama_3624	0.15	+0.6
4,263,603	+		Sama_3624	0.15	+2.4
4,263,603	+		Sama_3624	0.15	-1.9
4,263,603	+		Sama_3624	0.15	-0.6
4,263,604	-		Sama_3624	0.15	-1.2
4,263,604	-		Sama_3624	0.15	-0.0
4,263,604	-		Sama_3624	0.15	+0.9
4,263,604	-		Sama_3624	0.15	-0.8
4,263,604	-		Sama_3624	0.15	+1.1
4,263,604	-		Sama_3624	0.15	+1.3
4,263,613	+		Sama_3624	0.15	-0.4
4,263,614	-		Sama_3624	0.15	+1.1
4,263,617	-		Sama_3624	0.15	+1.1
4,263,617	-		Sama_3624	0.15	-0.8
4,263,621	+		Sama_3624	0.15	+0.8
4,263,621	+		Sama_3624	0.15	+1.4
4,263,621	+		Sama_3624	0.15	+2.3
4,263,621	+		Sama_3624	0.15	+0.9
4,263,621	+		Sama_3624	0.15	-1.8
4,263,622	-		Sama_3624	0.15	+1.3
4,263,622	-		Sama_3624	0.15	+0.4
4,263,622	-		Sama_3624	0.15	+0.0
4,263,622	-		Sama_3624	0.15	+0.1
4,263,627	+		Sama_3624	0.16	+1.2
4,263,627	+		Sama_3624	0.16	+0.9
4,263,627	+		Sama_3624	0.16	+1.3
4,263,627	+		Sama_3624	0.16	-0.7
4,263,628	-		Sama_3624	0.16	+0.8
4,263,628	-		Sama_3624	0.16	-1.6
4,263,628	-		Sama_3624	0.16	-0.4
4,263,646	+		Sama_3624	0.16	+2.9
4,263,647	-		Sama_3624	0.16	-0.7
4,263,647	-		Sama_3624	0.16	+2.6
4,263,662	-		Sama_3624	0.17	+1.0
4,263,678	+		Sama_3624	0.17	+0.7
4,263,678	+		Sama_3624	0.17	-0.5
4,263,678	+		Sama_3624	0.17	+2.4
4,263,679	-		Sama_3624	0.17	+0.2
4,263,679	-		Sama_3624	0.17	+0.7
4,263,679	-		Sama_3624	0.17	+2.0
4,263,684	+		Sama_3624	0.18	+0.7
4,263,684	+		Sama_3624	0.18	-0.4
4,263,684	+		Sama_3624	0.18	+0.0
4,263,684	+		Sama_3624	0.18	+1.2
4,263,684	+		Sama_3624	0.18	-1.4
4,263,684	+		Sama_3624	0.18	+0.7
4,263,684	+		Sama_3624	0.18	+2.5
4,263,684	+		Sama_3624	0.18	+0.3
4,263,684	+		Sama_3624	0.18	-1.0
4,263,685	-		Sama_3624	0.18	+1.1
4,263,685	-		Sama_3624	0.18	-1.2
4,263,685	-		Sama_3624	0.18	+1.6
4,263,685	-		Sama_3624	0.18	+0.9
4,263,685	-		Sama_3624	0.18	-0.5
4,263,685	-		Sama_3624	0.18	-1.4
4,263,685	-		Sama_3624	0.18	-0.8
4,263,685	-		Sama_3624	0.18	+0.4
4,263,685	-		Sama_3624	0.18	-0.1
4,263,685	-		Sama_3624	0.18	-0.4
4,263,688	+		Sama_3624	0.18	+0.9
4,263,688	+		Sama_3624	0.18	+2.5
4,263,715	+		Sama_3624	0.19	+0.3
4,263,716	-		Sama_3624	0.19	+2.4
4,263,716	-		Sama_3624	0.19	+1.4
4,263,716	-		Sama_3624	0.19	+1.3
4,263,727	+		Sama_3624	0.19	-0.7
4,263,727	+		Sama_3624	0.19	+0.4
4,263,728	-		Sama_3624	0.19	+0.6
4,263,728	-		Sama_3624	0.19	+0.0
4,263,806	+		Sama_3624	0.22	+1.6
4,263,806	+		Sama_3624	0.22	+1.2
4,263,807	-		Sama_3624	0.22	-1.4
4,263,824	-		Sama_3624	0.23	+2.1
4,263,824	-		Sama_3624	0.23	-1.2
4,263,872	+		Sama_3624	0.24	+0.1
4,263,872	+		Sama_3624	0.24	+1.3
4,263,873	-		Sama_3624	0.24	+0.6
4,263,873	-		Sama_3624	0.24	-0.3
4,263,873	-		Sama_3624	0.24	-0.6
4,263,873	-		Sama_3624	0.24	+2.0
4,263,906	+		Sama_3624	0.25	-0.4
4,263,906	+		Sama_3624	0.25	+1.4
4,263,906	+		Sama_3624	0.25	+1.6
4,263,907	-		Sama_3624	0.26	+2.9
4,263,907	-		Sama_3624	0.26	+1.2
4,263,907	-		Sama_3624	0.26	+1.8
4,263,907	-		Sama_3624	0.26	+0.4
4,263,907	-		Sama_3624	0.26	+2.9
4,263,907	-		Sama_3624	0.26	+2.5
4,263,907	-		Sama_3624	0.26	+1.4
4,263,907	-		Sama_3624	0.26	+0.1
4,263,949	+		Sama_3624	0.27	-0.6
4,263,949	+		Sama_3624	0.27	+0.1
4,263,960	+		Sama_3624	0.27	+1.3
4,264,050	-		Sama_3624	0.31	+1.6
4,264,065	+		Sama_3624	0.31	+1.8
4,264,098	+		Sama_3624	0.32	+1.1
4,264,098	+		Sama_3624	0.32	+0.5
4,264,099	-		Sama_3624	0.32	+1.4
4,264,118	+		Sama_3624	0.33	+0.1
4,264,119	-		Sama_3624	0.33	-1.1
4,264,119	-		Sama_3624	0.33	+1.4
4,264,119	-		Sama_3624	0.33	+0.9
4,264,119	-		Sama_3624	0.33	+0.3
4,264,137	+		Sama_3624	0.34	+2.0
4,264,138	-		Sama_3624	0.34	+1.0