Strain Fitness in Shewanella amazonensis SB2B around Sama_3499

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
4,130,039	+				-1.5
4,130,040	-				-0.1
4,130,061	+				+2.3
4,130,061	+				+1.6
4,130,062	-				+1.8
4,130,080	+				-0.2
4,130,080	+				-0.1
4,130,080	+				-1.0
4,130,080	+				-0.2
4,130,080	+				+1.1
4,130,081	-				+1.2
4,130,081	-				-0.5
4,130,081	-				+0.0
4,130,087	+		Sama_3498	0.11	+1.6
4,130,088	-		Sama_3498	0.11	+2.6
4,130,088	-		Sama_3498	0.11	-0.8
4,130,141	+		Sama_3498	0.17	-0.4
4,130,141	+		Sama_3498	0.17	-0.6
4,130,141	+		Sama_3498	0.17	-2.7
4,130,142	-		Sama_3498	0.17	-0.8
4,130,142	-		Sama_3498	0.17	+1.6
4,130,142	-		Sama_3498	0.17	+0.9
4,130,150	+		Sama_3498	0.18	+0.0
4,130,185	+		Sama_3498	0.23	+0.5
4,130,185	+		Sama_3498	0.23	+0.2
4,130,186	-		Sama_3498	0.23	+1.0
4,130,186	-		Sama_3498	0.23	+0.2
4,130,186	-		Sama_3498	0.23	+0.2
4,130,244	-		Sama_3498	0.30	+1.1
4,130,244	-		Sama_3498	0.30	+1.2
4,130,244	-		Sama_3498	0.30	-1.3
4,130,244	-		Sama_3498	0.30	+0.0
4,130,355	+		Sama_3498	0.43	-0.5
4,130,356	-		Sama_3498	0.43	+0.7
4,130,409	+		Sama_3498	0.50	-1.2
4,130,409	+		Sama_3498	0.50	+0.7
4,130,424	+		Sama_3498	0.52	-1.2
4,130,424	+		Sama_3498	0.52	+0.4
4,130,424	+		Sama_3498	0.52	-0.6
4,130,424	+		Sama_3498	0.52	+0.9
4,130,425	-		Sama_3498	0.52	-1.9
4,130,425	-		Sama_3498	0.52	-0.2
4,130,425	-		Sama_3498	0.52	+0.9
4,130,447	+		Sama_3498	0.54	+1.1
4,130,447	+		Sama_3498	0.54	+2.7
4,130,448	-		Sama_3498	0.55	+3.5
4,130,448	-		Sama_3498	0.55	+0.6
4,130,495	+		Sama_3498	0.60	-0.9
4,130,496	-		Sama_3498	0.60	+0.8
4,130,527	-		Sama_3498	0.64	-1.6
4,130,566	+		Sama_3498	0.69	-0.1
4,130,566	+		Sama_3498	0.69	-0.4
4,130,566	+		Sama_3498	0.69	-1.9
4,130,567	-		Sama_3498	0.69	+0.7
4,130,567	-		Sama_3498	0.69	-1.0
4,130,567	-		Sama_3498	0.69	+0.5
4,130,567	-		Sama_3498	0.69	-0.7
4,130,567	-		Sama_3498	0.69	+1.0
4,130,567	-		Sama_3498	0.69	+0.3
4,130,567	-		Sama_3498	0.69	+0.5
4,130,567	-		Sama_3498	0.69	+0.4
4,130,620	+		Sama_3498	0.75	-0.7
4,130,620	+		Sama_3498	0.75	+0.2
4,130,625	+		Sama_3498	0.76	-0.8
4,130,634	-		Sama_3498	0.77	-0.1
4,130,699	+		Sama_3498	0.85	-1.3
4,130,700	-		Sama_3498	0.85	-1.5
4,130,700	-		Sama_3498	0.85	-0.5
4,130,700	-		Sama_3498	0.85	+0.8
4,130,700	-		Sama_3498	0.85	-0.5
4,130,700	-		Sama_3498	0.85	-0.9
4,130,707	+		Sama_3498	0.86	+0.0
4,130,708	-		Sama_3498	0.86	-0.4
4,130,769	+				+0.5
4,130,769	+				-0.0
4,130,769	+				+0.0
4,130,769	+				+0.4
4,130,770	-				-0.7
4,130,770	-				+2.3
4,130,770	-				-0.0
4,130,770	-				-0.5
4,130,770	-				+2.4
4,130,770	-				-0.2
4,130,770	-				-0.2
4,130,770	-				+0.8
4,130,771	+				-2.0
4,130,771	+				-0.2
4,130,771	+				-1.1
4,130,771	+				-1.2
4,130,771	+				-0.4
4,130,771	+				+0.9
4,130,771	+				-0.9
4,130,771	+				+0.4
4,130,771	+				-1.4
4,130,771	+				-1.3
4,130,771	+				+0.8
4,130,771	+				-0.9
4,130,771	+				+1.7
4,130,771	+				+0.6
4,130,771	+				+0.2
4,130,771	+				-1.9
4,130,771	+				+1.8
4,130,771	+				+0.1
4,130,771	+				-0.0
4,130,771	+				-1.0
4,130,771	+				+1.8
4,130,772	-				+0.9
4,130,772	-				+0.9
4,130,772	-				-0.1
4,130,772	-				+0.8
4,130,772	-				+0.7
4,130,772	-				+0.3
4,130,772	-				+0.7
4,130,772	-				-2.0
4,130,772	-				+0.9
4,130,772	-				+0.7
4,130,772	-				+0.6
4,130,772	-				+1.3
4,130,772	-				-0.0
4,130,772	-				+1.2
4,130,772	-				+1.2
4,130,772	-				-0.5
4,130,772	-				+1.0
4,130,772	-				+0.3
4,130,784	+				+1.6
4,130,784	+				+0.0
4,130,784	+				+0.2
4,130,785	-				-2.0
4,130,785	-				+0.0
4,130,785	-				+0.2
4,130,804	-				+0.2
4,130,804	-				-0.7
4,130,804	-				-0.1
4,130,822	+				-2.5
4,130,822	+				+1.2
4,130,822	+				-0.4
4,130,823	-				+0.4
4,130,828	+				+0.4
4,130,828	+				+0.7
4,130,828	+				+0.5
4,130,829	-				+0.1
4,130,857	-				+2.0
4,130,875	-				+0.2
4,130,900	-				-2.2
4,130,927	-		Sama_3499	0.11	+0.1
4,130,927	-		Sama_3499	0.11	-1.6
4,130,946	+		Sama_3499	0.13	-1.6
4,130,946	+		Sama_3499	0.13	+1.7
4,130,969	+		Sama_3499	0.15	+0.8
4,130,969	+		Sama_3499	0.15	-0.6
4,130,970	-		Sama_3499	0.15	+1.6
4,130,970	-		Sama_3499	0.15	-0.3
4,131,014	+		Sama_3499	0.19	-1.9
4,131,014	+		Sama_3499	0.19	+0.8
4,131,014	+		Sama_3499	0.19	-2.1
4,131,015	-		Sama_3499	0.19	-1.0
4,131,015	-		Sama_3499	0.19	-1.8
4,131,123	+		Sama_3499	0.30	-0.2
4,131,124	-		Sama_3499	0.30	-2.3
4,131,130	-		Sama_3499	0.31	-0.1
4,131,130	-		Sama_3499	0.31	+0.1
4,131,130	-		Sama_3499	0.31	+0.8
4,131,130	-		Sama_3499	0.31	+0.6
4,131,166	+		Sama_3499	0.34	-0.6
4,131,166	+		Sama_3499	0.34	-0.1
4,131,166	+		Sama_3499	0.34	-1.6
4,131,216	-		Sama_3499	0.39	-0.4
4,131,216	-		Sama_3499	0.39	-1.3
4,131,284	+		Sama_3499	0.46	-1.2
4,131,284	+		Sama_3499	0.46	+0.9
4,131,285	-		Sama_3499	0.46	-0.2
4,131,285	-		Sama_3499	0.46	-0.4
4,131,374	+		Sama_3499	0.55	-0.8
4,131,374	+		Sama_3499	0.55	-0.0
4,131,374	+		Sama_3499	0.55	-0.3
4,131,374	+		Sama_3499	0.55	+0.2
4,131,375	-		Sama_3499	0.55	-0.2
4,131,375	-		Sama_3499	0.55	+0.6
4,131,461	+		Sama_3499	0.63	+0.5
4,131,461	+		Sama_3499	0.63	+0.1
4,131,461	+		Sama_3499	0.63	-0.4
4,131,461	+		Sama_3499	0.63	+1.0
4,131,461	+		Sama_3499	0.63	+0.6
4,131,462	-		Sama_3499	0.63	-1.5
4,131,462	-		Sama_3499	0.63	+1.7
4,131,462	-		Sama_3499	0.63	-0.5
4,131,478	+		Sama_3499	0.65	+2.6
4,131,478	+		Sama_3499	0.65	+1.4
4,131,478	+		Sama_3499	0.65	-0.4
4,131,478	+		Sama_3499	0.65	-1.2
4,131,478	+		Sama_3499	0.65	+1.4
4,131,478	+		Sama_3499	0.65	-2.5
4,131,479	-		Sama_3499	0.65	-0.1
4,131,479	-		Sama_3499	0.65	+0.2
4,131,479	-		Sama_3499	0.65	-2.0
4,131,479	-		Sama_3499	0.65	+2.6
4,131,479	-		Sama_3499	0.65	-0.3
4,131,479	-		Sama_3499	0.65	+0.0
4,131,681	+		Sama_3499	0.85	+0.3
4,131,681	+		Sama_3499	0.85	-0.3
4,131,681	+		Sama_3499	0.85	-1.0
4,131,681	+		Sama_3499	0.85	+2.9
4,131,682	-		Sama_3499	0.85	-0.5
4,131,682	-		Sama_3499	0.85	+0.7
4,131,682	-		Sama_3499	0.85	+0.1
4,131,682	-		Sama_3499	0.85	+1.3
4,131,682	-		Sama_3499	0.85	-0.4
4,131,700	+		Sama_3499	0.86	-0.3
4,131,700	+		Sama_3499	0.86	+0.7
4,131,700	+		Sama_3499	0.86	+0.1
4,131,700	+		Sama_3499	0.86	+0.2
4,131,700	+		Sama_3499	0.86	-1.3
4,131,700	+		Sama_3499	0.86	-2.7
4,131,701	-		Sama_3499	0.87	-0.2
4,131,707	+		Sama_3499	0.87	-0.9
4,131,707	+		Sama_3499	0.87	+0.5
4,131,707	+		Sama_3499	0.87	-1.1
4,131,707	+		Sama_3499	0.87	+0.8
4,131,708	-		Sama_3499	0.87	-0.2
4,131,708	-		Sama_3499	0.87	-0.3
4,131,708	-		Sama_3499	0.87	-0.1
4,131,708	-		Sama_3499	0.87	-1.8
4,131,708	-		Sama_3499	0.87	+1.2
4,131,708	-		Sama_3499	0.87	-1.9
4,131,708	-		Sama_3499	0.87	-2.6
4,131,835	+				-1.6
4,131,932	+				-3.2
4,131,932	+				-2.4
4,131,932	+				-0.4
4,131,932	+				-0.4
4,131,933	-				+0.4
4,131,935	-				-0.2
4,132,008	+		Sama_3500	0.17	-0.6
4,132,049	+		Sama_3500	0.20	+1.1
4,132,049	+		Sama_3500	0.20	+1.1
4,132,049	+		Sama_3500	0.20	-1.1
4,132,050	-		Sama_3500	0.21	-0.7
4,132,050	-		Sama_3500	0.21	+0.7
4,132,050	-		Sama_3500	0.21	+0.0
4,132,050	-		Sama_3500	0.21	-1.8
4,132,050	-		Sama_3500	0.21	-0.8
4,132,107	+		Sama_3500	0.26	-1.0
4,132,107	+		Sama_3500	0.26	-0.9
4,132,108	-		Sama_3500	0.26	-0.5
4,132,156	+		Sama_3500	0.31	-0.4
4,132,157	-		Sama_3500	0.31	-0.2
4,132,157	-		Sama_3500	0.31	-0.9
4,132,157	-		Sama_3500	0.31	-0.3
4,132,310	+		Sama_3500	0.45	+0.5
4,132,310	+		Sama_3500	0.45	-0.4
4,132,310	+		Sama_3500	0.45	-2.8
4,132,310	+		Sama_3500	0.45	+1.4
4,132,310	+		Sama_3500	0.45	-1.6
4,132,310	+		Sama_3500	0.45	+0.3
4,132,310	+		Sama_3500	0.45	+0.8
4,132,310	+		Sama_3500	0.45	+0.4
4,132,311	-		Sama_3500	0.45	+1.0
4,132,311	-		Sama_3500	0.45	-3.3
4,132,311	-		Sama_3500	0.45	-0.4
4,132,311	-		Sama_3500	0.45	-1.8
4,132,311	-		Sama_3500	0.45	+0.1
4,132,311	-		Sama_3500	0.45	+0.2
4,132,312	+		Sama_3500	0.46	+1.3
4,132,312	+		Sama_3500	0.46	+2.2
4,132,313	-		Sama_3500	0.46	+0.6
4,132,313	-		Sama_3500	0.46	+0.0
4,132,327	+		Sama_3500	0.47	-0.3
4,132,337	+		Sama_3500	0.48	-1.0
4,132,337	+		Sama_3500	0.48	+1.1
4,132,337	+		Sama_3500	0.48	-0.9
4,132,337	+		Sama_3500	0.48	+0.6
4,132,337	+		Sama_3500	0.48	+0.7
4,132,337	+		Sama_3500	0.48	+0.7
4,132,337	+		Sama_3500	0.48	-0.1
4,132,337	+		Sama_3500	0.48	+0.3
4,132,337	+		Sama_3500	0.48	+2.8
4,132,337	+		Sama_3500	0.48	-0.4
4,132,337	+		Sama_3500	0.48	+0.4
4,132,337	+		Sama_3500	0.48	+0.9
4,132,337	+		Sama_3500	0.48	+0.7
4,132,337	+		Sama_3500	0.48	+1.9
4,132,337	+		Sama_3500	0.48	-0.5
4,132,337	+		Sama_3500	0.48	+0.6
4,132,337	+		Sama_3500	0.48	+2.1
4,132,337	+		Sama_3500	0.48	+1.0
4,132,337	+		Sama_3500	0.48	-0.0
4,132,337	+		Sama_3500	0.48	-1.4
4,132,337	+		Sama_3500	0.48	+0.8
4,132,337	+		Sama_3500	0.48	+0.7
4,132,337	+		Sama_3500	0.48	+0.7
4,132,337	+		Sama_3500	0.48	-2.9
4,132,338	-		Sama_3500	0.48	+0.1
4,132,338	-		Sama_3500	0.48	+1.1
4,132,338	-		Sama_3500	0.48	-1.0
4,132,338	-		Sama_3500	0.48	+1.0
4,132,338	-		Sama_3500	0.48	+0.7
4,132,338	-		Sama_3500	0.48	+0.9
4,132,338	-		Sama_3500	0.48	+0.8
4,132,338	-		Sama_3500	0.48	-2.2
4,132,338	-		Sama_3500	0.48	-0.3
4,132,338	-		Sama_3500	0.48	+0.9
4,132,338	-		Sama_3500	0.48	-0.6
4,132,338	-		Sama_3500	0.48	-0.2
4,132,338	-		Sama_3500	0.48	+1.2
4,132,338	-		Sama_3500	0.48	+0.6
4,132,338	-		Sama_3500	0.48	-2.1
4,132,338	-		Sama_3500	0.48	+0.7
4,132,338	-		Sama_3500	0.48	+0.3
4,132,338	-		Sama_3500	0.48	-1.4
4,132,362	-		Sama_3500	0.50	+0.3
4,132,401	+		Sama_3500	0.54	-0.6
4,132,410	+		Sama_3500	0.55	-0.1
4,132,410	+		Sama_3500	0.55	+1.2
4,132,410	+		Sama_3500	0.55	+1.3
4,132,411	-		Sama_3500	0.55	+0.7
4,132,466	-		Sama_3500	0.60	-2.1
4,132,466	-		Sama_3500	0.60	-1.2
4,132,466	-		Sama_3500	0.60	+0.6
4,132,479	+		Sama_3500	0.61	-0.3
4,132,480	-		Sama_3500	0.62	+1.1
4,132,480	-		Sama_3500	0.62	+0.6
4,132,480	-		Sama_3500	0.62	-0.2
4,132,535	+		Sama_3500	0.67	+0.5
4,132,535	+		Sama_3500	0.67	+0.3
4,132,536	-		Sama_3500	0.67	+0.0
4,132,559	+		Sama_3500	0.69	+0.1
4,132,560	-		Sama_3500	0.69	+0.5
4,132,597	-		Sama_3500	0.73	+0.9
4,132,597	-		Sama_3500	0.73	-1.6
4,132,597	-		Sama_3500	0.73	-0.4
4,132,601	+		Sama_3500	0.73	+1.4
4,132,601	+		Sama_3500	0.73	+0.9
4,132,601	+		Sama_3500	0.73	-0.6
4,132,602	-		Sama_3500	0.73	-1.1
4,132,721	+		Sama_3500	0.84	+1.5
4,132,722	-		Sama_3500	0.85	-0.2
4,132,722	-		Sama_3500	0.85	+0.6
4,132,722	-		Sama_3500	0.85	+0.9
4,132,749	-		Sama_3500	0.87	+0.6
4,132,814	-				-0.3
4,132,814	-				+2.4
4,132,814	-				+0.6
4,132,814	-				-0.2