Strain Fitness in Shewanella amazonensis SB2B around Sama_3394

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
4,020,884	+		Sama_3392	0.66	+0.3
4,020,884	+		Sama_3392	0.66	-0.1
4,020,885	-		Sama_3392	0.66	-0.3
4,020,908	+		Sama_3392	0.71	+0.4
4,020,909	-		Sama_3392	0.71	-1.0
4,021,016	+				-1.0
4,021,016	+				-0.7
4,021,016	+				-1.4
4,021,016	+				-0.4
4,021,016	+				+1.1
4,021,017	-				-0.9
4,021,017	-				-0.0
4,021,017	-				+0.6
4,021,017	-				+0.8
4,021,017	-				+0.6
4,021,017	-				-2.3
4,021,018	+				-0.7
4,021,018	+				-0.4
4,021,019	-				-0.2
4,021,019	-				+0.9
4,021,019	-				-1.9
4,021,042	+				-1.8
4,021,042	+				+0.2
4,021,043	-				-1.4
4,021,043	-				-1.6
4,021,043	-				+0.4
4,021,048	+				-1.3
4,021,048	+				+1.2
4,021,048	+				+0.8
4,021,048	+				-0.2
4,021,049	-				+1.3
4,021,052	+				-2.2
4,021,052	+				-0.9
4,021,053	-				+0.9
4,021,053	-				-0.4
4,021,053	-				+1.0
4,021,053	-				+0.9
4,021,053	-				+0.9
4,021,065	+				-2.3
4,021,065	+				+0.2
4,021,065	+				-0.6
4,021,065	+				-0.7
4,021,065	+				-1.9
4,021,065	+				+0.7
4,021,065	+				-0.4
4,021,066	-				+1.8
4,021,066	-				-0.3
4,021,068	+				-1.2
4,021,068	+				-1.9
4,021,068	+				+1.5
4,021,068	+				-0.2
4,021,069	-				-0.3
4,021,069	-				-1.1
4,021,075	+				-0.1
4,021,148	+	fabG	Sama_3393	0.11	-2.3
4,021,148	+	fabG	Sama_3393	0.11	+0.3
4,021,149	-	fabG	Sama_3393	0.11	+0.7
4,021,149	-	fabG	Sama_3393	0.11	+0.6
4,021,166	+	fabG	Sama_3393	0.13	+0.6
4,021,167	-	fabG	Sama_3393	0.13	-1.0
4,021,167	-	fabG	Sama_3393	0.13	-1.5
4,021,310	+	fabG	Sama_3393	0.33	-0.5
4,021,310	+	fabG	Sama_3393	0.33	-2.7
4,021,311	-	fabG	Sama_3393	0.33	+2.2
4,021,313	+	fabG	Sama_3393	0.33	+1.8
4,021,314	-	fabG	Sama_3393	0.34	+1.5
4,021,389	+	fabG	Sama_3393	0.44	+0.4
4,021,389	+	fabG	Sama_3393	0.44	-1.3
4,021,389	+	fabG	Sama_3393	0.44	-1.9
4,021,389	+	fabG	Sama_3393	0.44	-1.4
4,021,389	+	fabG	Sama_3393	0.44	+0.3
4,021,390	-	fabG	Sama_3393	0.44	+1.5
4,021,415	+	fabG	Sama_3393	0.48	+0.8
4,021,415	+	fabG	Sama_3393	0.48	-1.7
4,021,416	-	fabG	Sama_3393	0.48	+0.6
4,021,416	-	fabG	Sama_3393	0.48	+0.6
4,021,416	-	fabG	Sama_3393	0.48	-0.1
4,021,521	+	fabG	Sama_3393	0.62	-2.2
4,021,526	+	fabG	Sama_3393	0.63	-1.4
4,021,526	+	fabG	Sama_3393	0.63	-0.8
4,021,526	+	fabG	Sama_3393	0.63	-1.6
4,021,526	+	fabG	Sama_3393	0.63	-1.2
4,021,526	+	fabG	Sama_3393	0.63	-0.4
4,021,527	-	fabG	Sama_3393	0.63	+0.5
4,021,527	-	fabG	Sama_3393	0.63	-1.1
4,021,527	-	fabG	Sama_3393	0.63	-1.7
4,021,527	-	fabG	Sama_3393	0.63	+0.2
4,021,550	-	fabG	Sama_3393	0.66	-2.3
4,021,603	+	fabG	Sama_3393	0.73	-0.6
4,021,604	-	fabG	Sama_3393	0.74	-2.7
4,021,751	+				+0.4
4,021,751	+				+1.1
4,021,751	+				-0.8
4,021,751	+				-2.0
4,021,751	+				-0.5
4,021,751	+				-1.7
4,021,751	+				-1.7
4,021,751	+				-0.7
4,021,751	+				-0.7
4,021,752	-				-0.4
4,021,752	-				+0.9
4,021,752	-				-0.4
4,021,757	-				-0.9
4,021,873	-				-0.5
4,021,873	-				-0.2
4,021,895	+				-0.4
4,021,895	+				-1.7
4,021,896	-				-0.4
4,021,967	+		Sama_3394	0.14	-1.2
4,021,967	+		Sama_3394	0.14	-1.7
4,022,012	+		Sama_3394	0.18	-1.4
4,022,012	+		Sama_3394	0.18	+0.8
4,022,013	-		Sama_3394	0.18	+2.0
4,022,013	-		Sama_3394	0.18	+1.2
4,022,013	-		Sama_3394	0.18	+0.7
4,022,102	+		Sama_3394	0.25	-0.2
4,022,118	+		Sama_3394	0.26	+0.3
4,022,163	+		Sama_3394	0.30	-1.9
4,022,163	+		Sama_3394	0.30	-0.3
4,022,163	+		Sama_3394	0.30	-1.1
4,022,172	+		Sama_3394	0.31	+0.7
4,022,172	+		Sama_3394	0.31	-0.7
4,022,172	+		Sama_3394	0.31	+0.4
4,022,172	+		Sama_3394	0.31	-0.0
4,022,173	-		Sama_3394	0.31	-0.5
4,022,173	-		Sama_3394	0.31	+2.2
4,022,197	+		Sama_3394	0.33	-0.0
4,022,197	+		Sama_3394	0.33	-0.7
4,022,197	+		Sama_3394	0.33	-1.4
4,022,197	+		Sama_3394	0.33	-3.2
4,022,197	+		Sama_3394	0.33	+1.9
4,022,197	+		Sama_3394	0.33	+1.5
4,022,197	+		Sama_3394	0.33	+0.8
4,022,197	+		Sama_3394	0.33	+0.2
4,022,197	+		Sama_3394	0.33	-2.0
4,022,197	+		Sama_3394	0.33	-2.2
4,022,197	+		Sama_3394	0.33	-1.0
4,022,197	+		Sama_3394	0.33	+0.2
4,022,197	+		Sama_3394	0.33	-2.4
4,022,197	+		Sama_3394	0.33	-2.7
4,022,198	-		Sama_3394	0.33	+0.8
4,022,198	-		Sama_3394	0.33	+0.8
4,022,198	-		Sama_3394	0.33	+2.5
4,022,198	-		Sama_3394	0.33	-0.6
4,022,198	-		Sama_3394	0.33	+0.3
4,022,199	+		Sama_3394	0.33	+1.2
4,022,200	-		Sama_3394	0.33	-0.5
4,022,234	+		Sama_3394	0.36	-0.7
4,022,234	+		Sama_3394	0.36	+0.4
4,022,234	+		Sama_3394	0.36	+0.8
4,022,235	-		Sama_3394	0.36	-1.6
4,022,235	-		Sama_3394	0.36	+1.0
4,022,235	-		Sama_3394	0.36	-0.8
4,022,235	-		Sama_3394	0.36	-1.0
4,022,235	-		Sama_3394	0.36	+1.3
4,022,235	-		Sama_3394	0.36	+0.5
4,022,242	+		Sama_3394	0.36	-0.3
4,022,242	+		Sama_3394	0.36	-1.2
4,022,242	+		Sama_3394	0.36	+3.1
4,022,242	+		Sama_3394	0.36	-1.7
4,022,243	-		Sama_3394	0.37	+3.0
4,022,243	-		Sama_3394	0.37	-1.2
4,022,243	-		Sama_3394	0.37	-0.6
4,022,243	-		Sama_3394	0.37	-0.7
4,022,243	-		Sama_3394	0.37	+0.5
4,022,243	-		Sama_3394	0.37	+2.4
4,022,268	+		Sama_3394	0.39	+0.1
4,022,268	+		Sama_3394	0.39	-1.2
4,022,269	-		Sama_3394	0.39	-2.0
4,022,306	+		Sama_3394	0.42	-2.0
4,022,306	+		Sama_3394	0.42	+0.2
4,022,306	+		Sama_3394	0.42	+1.0
4,022,306	+		Sama_3394	0.42	-0.3
4,022,306	+		Sama_3394	0.42	-1.4
4,022,307	-		Sama_3394	0.42	+0.0
4,022,307	-		Sama_3394	0.42	+0.6
4,022,307	-		Sama_3394	0.42	+2.3
4,022,307	-		Sama_3394	0.42	-1.0
4,022,312	-		Sama_3394	0.42	-1.0
4,022,312	-		Sama_3394	0.42	-1.6
4,022,312	-		Sama_3394	0.42	+1.1
4,022,312	-		Sama_3394	0.42	-1.8
4,022,317	+		Sama_3394	0.43	-0.9
4,022,317	+		Sama_3394	0.43	+1.4
4,022,317	+		Sama_3394	0.43	-2.1
4,022,317	+		Sama_3394	0.43	-2.2
4,022,318	-		Sama_3394	0.43	-0.4
4,022,332	+		Sama_3394	0.44	+0.6
4,022,332	+		Sama_3394	0.44	-1.8
4,022,332	+		Sama_3394	0.44	+0.1
4,022,332	+		Sama_3394	0.44	+0.3
4,022,332	+		Sama_3394	0.44	-0.0
4,022,332	+		Sama_3394	0.44	-1.2
4,022,333	-		Sama_3394	0.44	-0.7
4,022,333	-		Sama_3394	0.44	+0.5
4,022,333	-		Sama_3394	0.44	+0.7
4,022,333	-		Sama_3394	0.44	-1.7
4,022,333	-		Sama_3394	0.44	+0.3
4,022,338	-		Sama_3394	0.44	+1.3
4,022,431	+		Sama_3394	0.52	+0.2
4,022,433	+		Sama_3394	0.52	+2.1
4,022,433	+		Sama_3394	0.52	-1.9
4,022,434	-		Sama_3394	0.52	+0.6
4,022,486	+		Sama_3394	0.56	+0.6
4,022,486	+		Sama_3394	0.56	+0.2
4,022,487	-		Sama_3394	0.56	-0.0
4,022,502	+		Sama_3394	0.58	-0.7
4,022,502	+		Sama_3394	0.58	-1.2
4,022,503	-		Sama_3394	0.58	+1.4
4,022,503	-		Sama_3394	0.58	-1.0
4,022,503	-		Sama_3394	0.58	+0.5
4,022,550	+		Sama_3394	0.61	-0.2
4,022,550	+		Sama_3394	0.61	+0.6
4,022,550	+		Sama_3394	0.61	+0.7
4,022,550	+		Sama_3394	0.61	-1.1
4,022,551	-		Sama_3394	0.62	+0.5
4,022,551	-		Sama_3394	0.62	-2.0
4,022,551	-		Sama_3394	0.62	-3.3
4,022,551	-		Sama_3394	0.62	-1.4
4,022,554	+		Sama_3394	0.62	-0.1
4,022,554	+		Sama_3394	0.62	+0.7
4,022,555	-		Sama_3394	0.62	-3.4
4,022,555	-		Sama_3394	0.62	+1.3
4,022,555	-		Sama_3394	0.62	-0.4
4,022,578	-		Sama_3394	0.64	-0.7
4,022,615	+		Sama_3394	0.67	+0.1
4,022,615	+		Sama_3394	0.67	-0.4
4,022,616	-		Sama_3394	0.67	+0.9
4,022,616	-		Sama_3394	0.67	-2.0
4,022,616	-		Sama_3394	0.67	-0.2
4,022,616	-		Sama_3394	0.67	+1.6
4,022,616	-		Sama_3394	0.67	-0.3
4,022,616	-		Sama_3394	0.67	+2.3
4,022,616	-		Sama_3394	0.67	-0.1
4,022,684	-		Sama_3394	0.72	-0.5
4,022,684	-		Sama_3394	0.72	-0.9
4,022,763	+		Sama_3394	0.79	-2.6
4,022,763	+		Sama_3394	0.79	-0.7
4,022,763	+		Sama_3394	0.79	-2.1
4,022,764	-		Sama_3394	0.79	+0.4
4,022,764	-		Sama_3394	0.79	+1.2
4,022,788	+		Sama_3394	0.81	-0.2
4,022,788	+		Sama_3394	0.81	-0.9
4,022,788	+		Sama_3394	0.81	-0.2
4,022,788	+		Sama_3394	0.81	-1.8
4,022,788	+		Sama_3394	0.81	-1.1
4,022,789	-		Sama_3394	0.81	-2.6
4,022,789	-		Sama_3394	0.81	-1.4
4,022,790	+		Sama_3394	0.81	+0.5
4,022,791	-		Sama_3394	0.81	+0.9
4,022,791	-		Sama_3394	0.81	-1.6
4,022,918	-				+0.3
4,022,918	-				-0.9
4,022,918	-				-1.7
4,022,919	+				-1.3
4,022,920	-				+2.2
4,022,953	+				-0.2
4,022,954	-				+0.9
4,022,954	-				-1.4
4,022,954	-				+0.1
4,022,967	+				+0.3
4,022,967	+				-1.0
4,022,967	+				-1.6
4,022,968	-				-0.7
4,022,968	-				+0.2
4,022,968	-				+1.0
4,023,022	+				-3.6
4,023,022	+				-1.3
4,023,023	-				-0.4
4,023,023	-				-0.0
4,023,081	+				-0.7
4,023,081	+				+1.2
4,023,081	+				-1.7
4,023,081	+				-1.2
4,023,082	-				+0.3
4,023,082	-				-0.3
4,023,082	-				-2.2
4,023,082	-				+1.0
4,023,084	+				+1.0
4,023,085	-				+1.8
4,023,128	+				+1.4
4,023,128	+				+0.7
4,023,129	-				+0.7
4,023,129	-				+0.2
4,023,129	-				+0.9
4,023,129	-				-0.6
4,023,143	+		Sama_3395	0.11	-1.3
4,023,143	+		Sama_3395	0.11	-0.0
4,023,144	-		Sama_3395	0.11	+1.6
4,023,144	-		Sama_3395	0.11	-1.3
4,023,144	-		Sama_3395	0.11	-1.2
4,023,166	+		Sama_3395	0.14	+1.0
4,023,167	-		Sama_3395	0.15	+0.9
4,023,167	-		Sama_3395	0.15	+1.3
4,023,174	+		Sama_3395	0.16	-2.3
4,023,174	+		Sama_3395	0.16	-0.7
4,023,272	+		Sama_3395	0.29	-1.2
4,023,272	+		Sama_3395	0.29	-1.2
4,023,329	+		Sama_3395	0.36	-0.3
4,023,347	+		Sama_3395	0.39	+0.4
4,023,347	+		Sama_3395	0.39	+2.0
4,023,347	+		Sama_3395	0.39	-0.0
4,023,348	-		Sama_3395	0.39	-1.8
4,023,362	-		Sama_3395	0.41	-2.2
4,023,368	-		Sama_3395	0.42	-0.1
4,023,404	+		Sama_3395	0.47	+0.3
4,023,429	+		Sama_3395	0.50	-0.3
4,023,429	+		Sama_3395	0.50	-1.0
4,023,429	+		Sama_3395	0.50	+1.0
4,023,505	+		Sama_3395	0.60	-0.1
4,023,505	+		Sama_3395	0.60	+1.1
4,023,505	+		Sama_3395	0.60	+0.9
4,023,505	+		Sama_3395	0.60	-1.0
4,023,505	+		Sama_3395	0.60	-0.4
4,023,506	-		Sama_3395	0.60	+0.2
4,023,506	-		Sama_3395	0.60	+0.3
4,023,506	-		Sama_3395	0.60	+0.8
4,023,506	-		Sama_3395	0.60	+0.3
4,023,506	-		Sama_3395	0.60	-0.0
4,023,506	-		Sama_3395	0.60	-2.2
4,023,538	-		Sama_3395	0.65	-0.3
4,023,538	-		Sama_3395	0.65	+0.6
4,023,563	+		Sama_3395	0.68	+0.4
4,023,563	+		Sama_3395	0.68	+1.7
4,023,563	+		Sama_3395	0.68	-0.7
4,023,563	+		Sama_3395	0.68	+0.6
4,023,563	+		Sama_3395	0.68	+0.6
4,023,563	+		Sama_3395	0.68	+0.2
4,023,563	+		Sama_3395	0.68	-0.5
4,023,564	-		Sama_3395	0.68	-0.0
4,023,564	-		Sama_3395	0.68	-0.2
4,023,564	-		Sama_3395	0.68	-0.1
4,023,564	-		Sama_3395	0.68	+0.5
4,023,564	-		Sama_3395	0.68	-2.1
4,023,564	-		Sama_3395	0.68	+1.1
4,023,564	-		Sama_3395	0.68	-1.2
4,023,564	-		Sama_3395	0.68	-1.4
4,023,564	-		Sama_3395	0.68	+0.9
4,023,607	+		Sama_3395	0.74	+0.4
4,023,607	+		Sama_3395	0.74	-1.6
4,023,607	+		Sama_3395	0.74	+0.4
4,023,608	-		Sama_3395	0.74	+3.6
4,023,608	-		Sama_3395	0.74	+0.1
4,023,666	+		Sama_3395	0.82	+1.0
4,023,666	+		Sama_3395	0.82	-0.7
4,023,666	+		Sama_3395	0.82	+1.5
4,023,666	+		Sama_3395	0.82	+0.5
4,023,666	+		Sama_3395	0.82	-0.7
4,023,666	+		Sama_3395	0.82	-0.4
4,023,666	+		Sama_3395	0.82	-1.3
4,023,666	+		Sama_3395	0.82	-0.2
4,023,666	+		Sama_3395	0.82	-0.9
4,023,666	+		Sama_3395	0.82	+1.6
4,023,666	+		Sama_3395	0.82	+2.8
4,023,666	+		Sama_3395	0.82	+0.6
4,023,666	+		Sama_3395	0.82	-1.4
4,023,666	+		Sama_3395	0.82	-0.0
4,023,666	+		Sama_3395	0.82	+0.5
4,023,666	+		Sama_3395	0.82	-0.6
4,023,666	+		Sama_3395	0.82	+0.7
4,023,666	+		Sama_3395	0.82	+0.2
4,023,666	+		Sama_3395	0.82	-1.2
4,023,666	+		Sama_3395	0.82	+0.4
4,023,666	+		Sama_3395	0.82	+0.8
4,023,666	+		Sama_3395	0.82	+0.6
4,023,666	+		Sama_3395	0.82	-0.4
4,023,666	+		Sama_3395	0.82	-0.8
4,023,667	-		Sama_3395	0.82	+0.2
4,023,667	-		Sama_3395	0.82	-1.3
4,023,667	-		Sama_3395	0.82	+0.3
4,023,667	-		Sama_3395	0.82	-1.5
4,023,667	-		Sama_3395	0.82	+0.3
4,023,667	-		Sama_3395	0.82	+0.3
4,023,667	-		Sama_3395	0.82	+0.5
4,023,667	-		Sama_3395	0.82	-0.9
4,023,667	-		Sama_3395	0.82	-0.7
4,023,667	-		Sama_3395	0.82	+2.7
4,023,667	-		Sama_3395	0.82	+0.1
4,023,667	-		Sama_3395	0.82	+0.1
4,023,667	-		Sama_3395	0.82	+0.7
4,023,667	-		Sama_3395	0.82	-0.2
4,023,668	+		Sama_3395	0.82	+1.2
4,023,668	+		Sama_3395	0.82	+0.2
4,023,668	+		Sama_3395	0.82	-0.8
4,023,668	+		Sama_3395	0.82	-0.6
4,023,668	+		Sama_3395	0.82	-1.0
4,023,668	+		Sama_3395	0.82	+0.2
4,023,669	-		Sama_3395	0.82	+1.4
4,023,669	-		Sama_3395	0.82	-1.3
4,023,669	-		Sama_3395	0.82	-0.5
4,023,669	-		Sama_3395	0.82	+1.1
4,023,669	-		Sama_3395	0.82	-0.4
4,023,669	-		Sama_3395	0.82	-0.9
4,023,669	-		Sama_3395	0.82	-1.7
4,023,669	-		Sama_3395	0.82	-0.2
4,023,677	+		Sama_3395	0.83	-1.9
4,023,677	+		Sama_3395	0.83	+0.4
4,023,677	+		Sama_3395	0.83	-1.1
4,023,677	+		Sama_3395	0.83	-0.7
4,023,678	-		Sama_3395	0.84	-1.3
4,023,714	-		Sama_3395	0.88	+0.6
4,023,791	+				-3.6
4,023,791	+				+0.8
4,023,791	+				+1.1
4,023,792	-				-1.4
4,023,792	-				-0.5
4,023,794	+				-0.3
4,023,794	+				+0.1
4,023,794	+				-1.0
4,023,794	+				-0.6
4,023,794	+				-0.7
4,023,840	+				+0.3
4,023,842	+				+1.1
4,023,843	-				-0.6
4,023,843	-				+0.4
4,023,843	-				+0.6
4,023,893	-				-1.3
4,023,893	-				-0.5
4,023,952	+		Sama_3396	0.13	+0.7
4,023,952	+		Sama_3396	0.13	-1.0
4,023,954	+		Sama_3396	0.13	+0.4
4,023,971	+		Sama_3396	0.15	+0.6
4,023,971	+		Sama_3396	0.15	-1.1
4,023,971	+		Sama_3396	0.15	+1.6
4,023,971	+		Sama_3396	0.15	+0.9
4,023,972	-		Sama_3396	0.15	+0.6
4,023,972	-		Sama_3396	0.15	+0.2