Strain Fitness in Shewanella amazonensis SB2B around Sama_2754

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
3,291,771	+		Sama_2753	0.46	+1.1
3,291,772	-		Sama_2753	0.46	+1.0
3,291,772	-		Sama_2753	0.46	+0.3
3,291,776	-		Sama_2753	0.47	+1.2
3,291,843	+		Sama_2753	0.51	-2.7
3,291,844	-		Sama_2753	0.51	+0.6
3,291,895	+		Sama_2753	0.55	+0.4
3,291,895	+		Sama_2753	0.55	-1.4
3,291,895	+		Sama_2753	0.55	-0.9
3,291,895	+		Sama_2753	0.55	+0.7
3,291,896	-		Sama_2753	0.55	+2.1
3,291,896	-		Sama_2753	0.55	+0.8
3,291,896	-		Sama_2753	0.55	+1.2
3,291,896	-		Sama_2753	0.55	-2.2
3,291,927	+		Sama_2753	0.57	+0.4
3,291,927	+		Sama_2753	0.57	-0.9
3,291,928	-		Sama_2753	0.57	-0.2
3,291,975	+		Sama_2753	0.60	+0.3
3,291,975	+		Sama_2753	0.60	+0.4
3,291,976	-		Sama_2753	0.60	-0.1
3,291,976	-		Sama_2753	0.60	+2.2
3,291,976	-		Sama_2753	0.60	+0.3
3,291,981	+		Sama_2753	0.60	+0.2
3,291,981	+		Sama_2753	0.60	-0.7
3,291,981	+		Sama_2753	0.60	+0.0
3,291,996	+		Sama_2753	0.61	+1.0
3,292,192	-		Sama_2753	0.75	+0.3
3,292,192	-		Sama_2753	0.75	-1.0
3,292,192	-		Sama_2753	0.75	-0.8
3,292,193	+		Sama_2753	0.75	-0.5
3,292,193	+		Sama_2753	0.75	-0.2
3,292,193	+		Sama_2753	0.75	+1.1
3,292,193	+		Sama_2753	0.75	+0.1
3,292,193	+		Sama_2753	0.75	+0.6
3,292,193	+		Sama_2753	0.75	+0.5
3,292,193	+		Sama_2753	0.75	+0.9
3,292,193	+		Sama_2753	0.75	-1.8
3,292,193	+		Sama_2753	0.75	-2.4
3,292,193	+		Sama_2753	0.75	-2.4
3,292,193	+		Sama_2753	0.75	+0.2
3,292,193	+		Sama_2753	0.75	-0.3
3,292,193	+		Sama_2753	0.75	+1.2
3,292,193	+		Sama_2753	0.75	+0.2
3,292,193	+		Sama_2753	0.75	+0.6
3,292,194	-		Sama_2753	0.75	-0.6
3,292,194	-		Sama_2753	0.75	+0.4
3,292,194	-		Sama_2753	0.75	+0.4
3,292,194	-		Sama_2753	0.75	+0.5
3,292,194	-		Sama_2753	0.75	-0.4
3,292,194	-		Sama_2753	0.75	-0.8
3,292,194	-		Sama_2753	0.75	-1.0
3,292,233	-		Sama_2753	0.78	-2.9
3,292,233	-		Sama_2753	0.78	-0.4
3,292,251	+		Sama_2753	0.79	-1.6
3,292,252	-		Sama_2753	0.79	+0.3
3,292,252	-		Sama_2753	0.79	-0.2
3,292,292	+		Sama_2753	0.82	-2.6
3,292,292	+		Sama_2753	0.82	-1.1
3,292,293	-		Sama_2753	0.82	-0.6
3,292,317	+		Sama_2753	0.83	+1.9
3,292,386	+		Sama_2753	0.88	+0.6
3,292,387	-		Sama_2753	0.88	-1.4
3,292,388	+		Sama_2753	0.88	-0.6
3,292,388	+		Sama_2753	0.88	+1.4
3,292,388	+		Sama_2753	0.88	+0.1
3,292,388	+		Sama_2753	0.88	+1.1
3,292,389	-		Sama_2753	0.88	-0.4
3,292,389	-		Sama_2753	0.88	+0.9
3,292,389	-		Sama_2753	0.88	+0.9
3,292,389	-		Sama_2753	0.88	+0.7
3,292,389	-		Sama_2753	0.88	-1.9
3,292,389	-		Sama_2753	0.88	+1.2
3,292,397	-		Sama_2753	0.89	+0.1
3,292,527	+				-1.4
3,292,563	+				-0.2
3,292,563	+				+0.0
3,292,563	+				+0.7
3,292,563	+				-0.5
3,292,563	+				-2.2
3,292,564	-				+0.8
3,292,564	-				-0.4
3,292,564	-				+0.4
3,292,564	-				-1.0
3,292,564	-				-0.1
3,292,581	-				-0.4
3,292,581	-				+1.5
3,292,599	-				+1.7
3,292,694	-				-0.8
3,292,756	-				-1.6
3,292,764	+				-1.4
3,292,765	-				+1.2
3,292,765	-				-1.5
3,292,777	+				-0.5
3,292,778	-				-0.6
3,292,804	+				-1.6
3,292,828	-				+0.6
3,292,828	-				+0.9
3,292,870	+		Sama_2754	0.16	-0.4
3,292,870	+		Sama_2754	0.16	+0.5
3,292,871	-		Sama_2754	0.16	+1.8
3,292,871	-		Sama_2754	0.16	+0.3
3,292,930	+		Sama_2754	0.24	-0.3
3,293,089	+		Sama_2754	0.45	+1.6
3,293,089	+		Sama_2754	0.45	-1.8
3,293,089	+		Sama_2754	0.45	-1.1
3,293,090	-		Sama_2754	0.45	+1.9
3,293,119	-		Sama_2754	0.49	-0.3
3,293,140	+		Sama_2754	0.52	+2.0
3,293,140	+		Sama_2754	0.52	-0.7
3,293,140	+		Sama_2754	0.52	-1.4
3,293,140	+		Sama_2754	0.52	+0.3
3,293,142	+		Sama_2754	0.52	+0.4
3,293,142	+		Sama_2754	0.52	-0.9
3,293,142	+		Sama_2754	0.52	+0.2
3,293,142	+		Sama_2754	0.52	+0.2
3,293,142	+		Sama_2754	0.52	+1.2
3,293,143	-		Sama_2754	0.52	-0.4
3,293,143	-		Sama_2754	0.52	-0.0
3,293,143	-		Sama_2754	0.52	-1.4
3,293,143	-		Sama_2754	0.52	+1.2
3,293,143	-		Sama_2754	0.52	+0.5
3,293,156	-		Sama_2754	0.54	-0.8
3,293,172	+		Sama_2754	0.56	-1.1
3,293,172	+		Sama_2754	0.56	-0.3
3,293,173	-		Sama_2754	0.56	+0.7
3,293,173	-		Sama_2754	0.56	+0.3
3,293,173	-		Sama_2754	0.56	+1.0
3,293,173	-		Sama_2754	0.56	-0.6
3,293,193	+		Sama_2754	0.59	+0.2
3,293,193	+		Sama_2754	0.59	-0.9
3,293,194	-		Sama_2754	0.59	-1.9
3,293,194	-		Sama_2754	0.59	+1.1
3,293,194	-		Sama_2754	0.59	+0.5
3,293,194	-		Sama_2754	0.59	+0.2
3,293,212	+		Sama_2754	0.62	+0.6
3,293,212	+		Sama_2754	0.62	-1.6
3,293,213	-		Sama_2754	0.62	-0.4
3,293,213	-		Sama_2754	0.62	+0.5
3,293,213	-		Sama_2754	0.62	-1.4
3,293,214	+		Sama_2754	0.62	+0.6
3,293,214	+		Sama_2754	0.62	-0.8
3,293,214	+		Sama_2754	0.62	-0.4
3,293,215	-		Sama_2754	0.62	-0.9
3,293,215	-		Sama_2754	0.62	-0.9
3,293,215	-		Sama_2754	0.62	+0.3
3,293,215	-		Sama_2754	0.62	-0.4
3,293,215	-		Sama_2754	0.62	-1.4
3,293,218	+		Sama_2754	0.62	+0.7
3,293,218	+		Sama_2754	0.62	-0.8
3,293,219	-		Sama_2754	0.62	+0.1
3,293,219	-		Sama_2754	0.62	+0.3
3,293,219	-		Sama_2754	0.62	+1.3
3,293,238	+		Sama_2754	0.65	+1.7
3,293,238	+		Sama_2754	0.65	+1.2
3,293,274	+		Sama_2754	0.70	+1.8
3,293,274	+		Sama_2754	0.70	-0.4
3,293,292	+		Sama_2754	0.72	-1.4
3,293,309	-		Sama_2754	0.75	-1.7
3,293,509	+				+2.2
3,293,509	+				-0.6
3,293,510	-				+1.9
3,293,510	-				+0.2
3,293,574	-				+0.6
3,293,673	+				-0.8
3,293,673	+				-1.6
3,293,714	+				-3.6
3,293,714	+				-2.9
3,293,743	+				-2.7
3,293,797	+		Sama_2755	0.12	-0.5
3,293,798	-		Sama_2755	0.12	-1.4
3,293,799	+		Sama_2755	0.12	-0.2
3,293,799	+		Sama_2755	0.12	-1.3
3,293,799	+		Sama_2755	0.12	-0.3
3,293,799	+		Sama_2755	0.12	-1.8
3,293,800	-		Sama_2755	0.12	-0.2
3,293,800	-		Sama_2755	0.12	-0.4
3,293,863	-		Sama_2755	0.16	+0.8
3,293,863	-		Sama_2755	0.16	-2.4
3,293,863	-		Sama_2755	0.16	-0.9
3,293,863	-		Sama_2755	0.16	-3.6
3,293,863	-		Sama_2755	0.16	-1.2
3,293,863	-		Sama_2755	0.16	-1.2
3,293,863	-		Sama_2755	0.16	-3.1
3,293,863	-		Sama_2755	0.16	+0.5
3,294,034	+		Sama_2755	0.28	-2.4
3,294,035	-		Sama_2755	0.28	+0.8
3,294,109	+		Sama_2755	0.33	-1.4
3,294,109	+		Sama_2755	0.33	+0.0
3,294,109	+		Sama_2755	0.33	+0.6
3,294,110	-		Sama_2755	0.33	-0.6
3,294,110	-		Sama_2755	0.33	-0.7
3,294,110	-		Sama_2755	0.33	-1.2
3,294,110	-		Sama_2755	0.33	-1.4
3,294,111	+		Sama_2755	0.33	-0.8
3,294,112	-		Sama_2755	0.33	-1.9
3,294,112	-		Sama_2755	0.33	-0.4
3,294,294	+		Sama_2755	0.45	-1.4
3,294,294	+		Sama_2755	0.45	-0.5
3,294,295	-		Sama_2755	0.45	-0.9
3,294,295	-		Sama_2755	0.45	+0.7
3,294,304	+		Sama_2755	0.46	-1.0
3,294,321	+		Sama_2755	0.47	-1.9
3,294,321	+		Sama_2755	0.47	-1.4
3,294,321	+		Sama_2755	0.47	-2.5
3,294,322	-		Sama_2755	0.47	-0.1
3,294,322	-		Sama_2755	0.47	-0.9
3,294,353	-		Sama_2755	0.49	-3.4
3,294,358	+		Sama_2755	0.50	-1.9
3,294,359	-		Sama_2755	0.50	+0.1
3,294,359	-		Sama_2755	0.50	-0.4
3,294,376	+		Sama_2755	0.51	+0.5
3,294,377	-		Sama_2755	0.51	-1.4
3,294,377	-		Sama_2755	0.51	-0.8
3,294,377	-		Sama_2755	0.51	-0.8
3,294,478	-		Sama_2755	0.58	-0.7
3,294,478	-		Sama_2755	0.58	-0.4
3,294,495	+		Sama_2755	0.59	-1.5
3,294,495	+		Sama_2755	0.59	-2.9