Strain Fitness in Shewanella amazonensis SB2B around Sama_2519

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
3,025,956	+		Sama_2518	0.47	+0.0
3,025,957	-		Sama_2518	0.47	+1.8
3,025,957	-		Sama_2518	0.47	+2.5
3,025,957	-		Sama_2518	0.47	-0.5
3,025,957	-		Sama_2518	0.47	+1.2
3,025,957	-		Sama_2518	0.47	+0.5
3,025,957	-		Sama_2518	0.47	-0.5
3,026,014	-		Sama_2518	0.50	+0.6
3,026,014	-		Sama_2518	0.50	-0.4
3,026,014	-		Sama_2518	0.50	+0.5
3,026,014	-		Sama_2518	0.50	+0.9
3,026,014	-		Sama_2518	0.50	+0.4
3,026,135	-		Sama_2518	0.58	-0.5
3,026,164	-		Sama_2518	0.60	+0.9
3,026,164	-		Sama_2518	0.60	+1.5
3,026,188	+		Sama_2518	0.61	+0.4
3,026,188	+		Sama_2518	0.61	+0.1
3,026,188	+		Sama_2518	0.61	-3.0
3,026,188	+		Sama_2518	0.61	+0.7
3,026,188	+		Sama_2518	0.61	-1.1
3,026,188	+		Sama_2518	0.61	-0.7
3,026,189	-		Sama_2518	0.61	+0.4
3,026,189	-		Sama_2518	0.61	-0.9
3,026,189	-		Sama_2518	0.61	+0.3
3,026,189	-		Sama_2518	0.61	+1.1
3,026,189	-		Sama_2518	0.61	+0.4
3,026,189	-		Sama_2518	0.61	+0.6
3,026,280	+		Sama_2518	0.67	+1.3
3,026,281	-		Sama_2518	0.67	+1.1
3,026,378	+		Sama_2518	0.73	+1.7
3,026,378	+		Sama_2518	0.73	-0.8
3,026,378	+		Sama_2518	0.73	+0.8
3,026,380	+		Sama_2518	0.73	+1.7
3,026,380	+		Sama_2518	0.73	-2.3
3,026,380	+		Sama_2518	0.73	+1.6
3,026,380	+		Sama_2518	0.73	-1.2
3,026,381	-		Sama_2518	0.73	-2.1
3,026,381	-		Sama_2518	0.73	-1.7
3,026,381	-		Sama_2518	0.73	+0.2
3,026,381	-		Sama_2518	0.73	+0.1
3,026,381	-		Sama_2518	0.73	+0.5
3,026,393	-		Sama_2518	0.74	+1.9
3,026,505	+		Sama_2518	0.81	-0.3
3,026,505	+		Sama_2518	0.81	+0.9
3,026,505	+		Sama_2518	0.81	-0.1
3,026,506	-		Sama_2518	0.81	-0.0
3,026,526	+		Sama_2518	0.82	+2.7
3,026,526	+		Sama_2518	0.82	-0.5
3,026,526	+		Sama_2518	0.82	-0.3
3,026,526	+		Sama_2518	0.82	+0.7
3,026,527	-		Sama_2518	0.82	-0.6
3,026,527	-		Sama_2518	0.82	+1.4
3,026,527	-		Sama_2518	0.82	-0.2
3,026,528	+		Sama_2518	0.83	+2.3
3,026,528	+		Sama_2518	0.83	+1.1
3,026,528	+		Sama_2518	0.83	+1.4
3,026,529	-		Sama_2518	0.83	-0.5
3,026,529	-		Sama_2518	0.83	+0.6
3,026,529	-		Sama_2518	0.83	+0.4
3,026,529	-		Sama_2518	0.83	-0.2
3,026,529	-		Sama_2518	0.83	-1.2
3,026,564	+		Sama_2518	0.85	+1.2
3,026,564	+		Sama_2518	0.85	+0.2
3,026,564	+		Sama_2518	0.85	+0.4
3,026,565	-		Sama_2518	0.85	+0.4
3,026,565	-		Sama_2518	0.85	-0.1
3,026,565	-		Sama_2518	0.85	+0.5
3,026,565	-		Sama_2518	0.85	+0.3
3,026,569	+		Sama_2518	0.85	+0.9
3,026,569	+		Sama_2518	0.85	+2.0
3,026,570	-		Sama_2518	0.85	+1.9
3,026,597	-		Sama_2518	0.87	+0.8
3,026,624	+		Sama_2518	0.89	+0.5
3,026,624	+		Sama_2518	0.89	+0.8
3,026,624	+		Sama_2518	0.89	-0.0
3,026,624	+		Sama_2518	0.89	+0.1
3,026,624	+		Sama_2518	0.89	-0.8
3,026,625	-		Sama_2518	0.89	-1.4
3,026,625	-		Sama_2518	0.89	+1.4
3,026,750	+				+2.4
3,026,751	-				+0.4
3,026,766	+				+0.5
3,026,766	+				+1.4
3,026,766	+				-0.1
3,026,766	+				+0.8
3,026,767	-				+0.7
3,026,964	-				-2.9
3,026,967	-				-0.6
3,027,081	-				-1.1
3,027,105	-		Sama_2519	0.10	-1.1
3,027,170	+		Sama_2519	0.15	-1.0
3,027,171	-		Sama_2519	0.15	-0.7
3,027,218	-		Sama_2519	0.18	-0.2
3,027,249	+		Sama_2519	0.20	+0.8
3,027,249	+		Sama_2519	0.20	+0.4
3,027,249	+		Sama_2519	0.20	+0.3
3,027,249	+		Sama_2519	0.20	-0.9
3,027,250	-		Sama_2519	0.20	-1.8
3,027,250	-		Sama_2519	0.20	+0.1
3,027,250	-		Sama_2519	0.20	-1.8
3,027,268	+		Sama_2519	0.21	-0.1
3,027,285	-		Sama_2519	0.23	+1.9
3,027,285	-		Sama_2519	0.23	-0.5
3,027,311	+		Sama_2519	0.24	+0.9
3,027,312	-		Sama_2519	0.24	-0.9
3,027,312	-		Sama_2519	0.24	-0.8
3,027,312	-		Sama_2519	0.24	-0.4
3,027,429	+		Sama_2519	0.32	+0.4
3,027,483	+		Sama_2519	0.36	-1.0
3,027,483	+		Sama_2519	0.36	-0.3
3,027,483	+		Sama_2519	0.36	+0.2
3,027,484	+		Sama_2519	0.36	+0.6
3,027,484	-		Sama_2519	0.36	+0.5
3,027,484	-		Sama_2519	0.36	-1.6
3,027,505	+		Sama_2519	0.38	-0.1
3,027,555	+		Sama_2519	0.41	-0.1
3,027,555	+		Sama_2519	0.41	+0.3
3,027,555	+		Sama_2519	0.41	-0.4
3,027,556	-		Sama_2519	0.41	+2.1
3,027,556	-		Sama_2519	0.41	+1.7
3,027,720	-		Sama_2519	0.52	-0.2
3,027,915	-		Sama_2519	0.66	-0.3
3,027,948	-		Sama_2519	0.68	+0.8
3,028,004	+		Sama_2519	0.72	-0.1
3,028,004	+		Sama_2519	0.72	+1.6
3,028,004	+		Sama_2519	0.72	-1.7
3,028,007	+		Sama_2519	0.72	-1.4
3,028,103	+		Sama_2519	0.79	+0.8
3,028,103	+		Sama_2519	0.79	-1.4
3,028,197	+		Sama_2519	0.85	+0.1
3,028,197	+		Sama_2519	0.85	-0.6
3,028,198	-		Sama_2519	0.85	+0.5
3,028,209	+		Sama_2519	0.86	+1.6
3,028,209	+		Sama_2519	0.86	-0.8
3,028,209	+		Sama_2519	0.86	-0.7
3,028,210	-		Sama_2519	0.86	-0.7
3,028,210	-		Sama_2519	0.86	+0.8
3,028,210	-		Sama_2519	0.86	+0.7
3,028,210	-		Sama_2519	0.86	-2.9
3,028,210	-		Sama_2519	0.86	-0.5
3,028,210	-		Sama_2519	0.86	+0.4
3,028,210	-		Sama_2519	0.86	-0.8
3,028,210	-		Sama_2519	0.86	+2.3
3,028,210	-		Sama_2519	0.86	+2.6
3,028,235	+		Sama_2519	0.88	-0.9
3,028,397	+				-1.6
3,028,398	-				+1.1
3,028,398	-				+0.4
3,028,398	-				+0.1
3,028,510	+				+1.0
3,028,514	+				+1.6
3,028,514	+				+0.4
3,028,514	+				+0.5
3,028,515	-				+0.4
3,028,534	+				-0.2
3,028,534	+				+0.9
3,028,534	+				+0.2
3,028,534	+				+0.8
3,028,534	+				+0.9
3,028,534	+				+0.2
3,028,535	-				-0.0
3,028,535	-				+0.9
3,028,535	-				-1.5
3,028,535	-				-2.7
3,028,535	-				+0.9
3,028,535	-				-2.1
3,028,537	-				+0.4
3,028,537	-				+2.6
3,028,537	-				-1.1
3,028,537	-				-0.8
3,028,537	-				-0.0
3,028,537	-				-0.8
3,028,654	-		Sama_2520	0.12	-0.3
3,028,719	+		Sama_2520	0.19	+0.7
3,028,719	+		Sama_2520	0.19	-2.1
3,028,719	+		Sama_2520	0.19	+0.7
3,028,719	+		Sama_2520	0.19	+0.7
3,028,720	-		Sama_2520	0.20	+0.7
3,028,720	-		Sama_2520	0.20	-1.4
3,028,720	-		Sama_2520	0.20	+0.3
3,028,720	-		Sama_2520	0.20	+0.8
3,028,720	-		Sama_2520	0.20	+1.2
3,028,723	+		Sama_2520	0.20	+0.4
3,028,724	-		Sama_2520	0.20	-0.2
3,028,724	-		Sama_2520	0.20	+1.4
3,028,724	-		Sama_2520	0.20	-0.7
3,028,724	-		Sama_2520	0.20	-0.1
3,028,724	-		Sama_2520	0.20	+1.5
3,028,757	+		Sama_2520	0.24	+0.4
3,028,757	+		Sama_2520	0.24	-0.1
3,028,757	+		Sama_2520	0.24	+0.4
3,028,757	+		Sama_2520	0.24	-2.4
3,028,757	+		Sama_2520	0.24	+0.1
3,028,757	+		Sama_2520	0.24	-0.2
3,028,758	-		Sama_2520	0.24	-2.5
3,028,758	-		Sama_2520	0.24	+0.3
3,028,759	+		Sama_2520	0.24	+0.5
3,028,759	+		Sama_2520	0.24	+1.8
3,028,759	+		Sama_2520	0.24	-2.6
3,028,759	+		Sama_2520	0.24	-0.6
3,028,759	+		Sama_2520	0.24	+0.9
3,028,759	+		Sama_2520	0.24	+0.3
3,028,759	+		Sama_2520	0.24	+2.7
3,028,759	+		Sama_2520	0.24	+0.1
3,028,759	+		Sama_2520	0.24	-0.8
3,028,759	+		Sama_2520	0.24	+0.4
3,028,759	+		Sama_2520	0.24	+0.5
3,028,759	+		Sama_2520	0.24	+2.1
3,028,759	+		Sama_2520	0.24	+0.5
3,028,759	+		Sama_2520	0.24	+1.7
3,028,759	+		Sama_2520	0.24	-1.4
3,028,760	-		Sama_2520	0.24	+1.1
3,028,760	-		Sama_2520	0.24	-0.4
3,028,760	-		Sama_2520	0.24	+2.1
3,028,760	-		Sama_2520	0.24	+0.2
3,028,760	-		Sama_2520	0.24	+0.6
3,028,760	-		Sama_2520	0.24	-0.9
3,028,760	-		Sama_2520	0.24	+1.4
3,028,760	-		Sama_2520	0.24	-2.4
3,028,814	+		Sama_2520	0.30	+0.7
3,028,814	+		Sama_2520	0.30	+0.1
3,028,881	-		Sama_2520	0.37	+0.3
3,028,881	-		Sama_2520	0.37	+1.0
3,028,908	+		Sama_2520	0.40	+0.2
3,028,944	-		Sama_2520	0.44	-2.5
3,028,967	-		Sama_2520	0.47	-0.4
3,028,967	-		Sama_2520	0.47	-0.0
3,028,974	+		Sama_2520	0.48	+4.3
3,028,984	+		Sama_2520	0.49	-0.2
3,028,984	+		Sama_2520	0.49	+0.6
3,028,984	+		Sama_2520	0.49	+2.1
3,028,984	+		Sama_2520	0.49	-1.2
3,028,985	-		Sama_2520	0.49	+1.0
3,028,985	-		Sama_2520	0.49	+1.3
3,028,985	-		Sama_2520	0.49	-0.6
3,028,985	-		Sama_2520	0.49	+1.1
3,028,985	-		Sama_2520	0.49	+0.8
3,028,985	-		Sama_2520	0.49	+1.1
3,028,985	-		Sama_2520	0.49	-2.7
3,028,985	-		Sama_2520	0.49	+1.1
3,029,045	+		Sama_2520	0.55	-2.2
3,029,045	+		Sama_2520	0.55	-0.1
3,029,045	+		Sama_2520	0.55	+0.1
3,029,046	-		Sama_2520	0.55	-0.6
3,029,057	+		Sama_2520	0.57	-2.3
3,029,134	+		Sama_2520	0.65	+1.5
3,029,134	+		Sama_2520	0.65	+2.0
3,029,135	-		Sama_2520	0.65	+0.9
3,029,135	-		Sama_2520	0.65	+2.1
3,029,135	-		Sama_2520	0.65	+1.9
3,029,135	-		Sama_2520	0.65	+0.9
3,029,135	-		Sama_2520	0.65	+1.2
3,029,135	-		Sama_2520	0.65	+1.3
3,029,135	-		Sama_2520	0.65	+0.4
3,029,358	-		Sama_2520	0.90	+1.1