Strain Fitness in Shewanella amazonensis SB2B around Sama_2482

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
2,982,436	+				+0.2
2,982,447	+				+0.2
2,982,504	+		Sama_2480	0.11	+0.2
2,982,504	+		Sama_2480	0.11	+1.2
2,982,518	+		Sama_2480	0.16	+0.7
2,982,518	+		Sama_2480	0.16	+1.5
2,982,518	+		Sama_2480	0.16	+0.4
2,982,518	+		Sama_2480	0.16	+1.3
2,982,518	+		Sama_2480	0.16	-2.3
2,982,518	+		Sama_2480	0.16	-0.6
2,982,518	+		Sama_2480	0.16	+0.1
2,982,519	-		Sama_2480	0.16	+0.8
2,982,519	-		Sama_2480	0.16	+1.0
2,982,519	-		Sama_2480	0.16	+0.3
2,982,519	-		Sama_2480	0.16	-1.5
2,982,519	-		Sama_2480	0.16	-2.1
2,982,519	-		Sama_2480	0.16	-0.6
2,982,519	-		Sama_2480	0.16	-0.3
2,982,519	-		Sama_2480	0.16	+0.0
2,982,519	-		Sama_2480	0.16	+0.9
2,982,519	-		Sama_2480	0.16	-2.8
2,982,519	-		Sama_2480	0.16	+1.4
2,982,522	+		Sama_2480	0.17	+0.0
2,982,522	+		Sama_2480	0.17	-1.9
2,982,522	+		Sama_2480	0.17	+0.9
2,982,522	+		Sama_2480	0.17	-0.2
2,982,523	-		Sama_2480	0.17	+1.4
2,982,573	+		Sama_2480	0.35	-0.8
2,982,674	-		Sama_2480	0.70	+0.5
2,982,700	+		Sama_2480	0.79	+0.8
2,982,708	+		Sama_2480	0.82	+1.4
2,982,712	+		Sama_2480	0.83	-1.2
2,982,712	+		Sama_2480	0.83	+0.8
2,982,712	+		Sama_2480	0.83	+0.0
2,982,712	+		Sama_2480	0.83	-0.7
2,982,713	-		Sama_2480	0.83	+2.0
2,982,713	-		Sama_2480	0.83	+0.8
2,982,713	-		Sama_2480	0.83	+1.0
2,982,729	+		Sama_2480	0.89	-1.6
2,982,730	-		Sama_2480	0.89	-0.8
2,982,758	+				-0.2
2,982,778	+				-2.3
2,982,778	+				-0.1
2,982,779	-				+0.5
2,982,791	-				+1.0
2,982,791	-				+0.5
2,982,805	+				-2.6
2,982,805	+				-0.8
2,982,806	-				+1.4
2,982,807	+				+0.4
2,982,807	+				+1.0
2,982,807	+				-0.1
2,982,807	+				-0.1
2,982,807	+				+0.1
2,982,807	+				-1.3
2,982,808	-				+0.8
2,982,808	-				+1.4
2,982,808	-				+1.1
2,982,808	-				+0.1
2,982,811	+				-0.8
2,982,811	+				-1.1
2,982,811	+				+0.9
2,982,811	+				+0.8
2,982,811	+				+0.2
2,982,811	+				-0.2
2,982,811	+				-0.6
2,982,812	-				+0.4
2,982,812	-				-0.3
2,982,812	-				+0.6
2,982,814	-				-2.0
2,982,814	-				+0.9
2,982,836	+				-0.5
2,982,836	+				-0.1
2,982,836	+				-0.8
2,982,874	+				+2.6
2,982,874	+				-1.2
2,982,881	+				-0.3
2,982,922	+		Sama_2481	0.18	-0.3
2,982,923	-		Sama_2481	0.18	-1.0
2,982,923	-		Sama_2481	0.18	-0.9
2,982,942	+		Sama_2481	0.23	-0.6
2,982,942	+		Sama_2481	0.23	-1.5
2,982,942	+		Sama_2481	0.23	-2.0
2,982,942	+		Sama_2481	0.23	+0.1
2,982,942	+		Sama_2481	0.23	-0.4
2,982,942	+		Sama_2481	0.23	+0.2
2,982,942	+		Sama_2481	0.23	-2.1
2,982,942	+		Sama_2481	0.23	-0.2
2,982,943	-		Sama_2481	0.23	+0.0
2,982,943	-		Sama_2481	0.23	+0.7
2,982,944	+		Sama_2481	0.23	+0.6
2,982,944	+		Sama_2481	0.23	+0.2
2,982,944	+		Sama_2481	0.23	+0.9
2,982,945	-		Sama_2481	0.23	-1.5
2,982,945	-		Sama_2481	0.23	+0.0
2,982,945	-		Sama_2481	0.23	+0.7
2,982,959	+		Sama_2481	0.27	+0.8
2,982,990	+		Sama_2481	0.34	+1.7
2,982,990	+		Sama_2481	0.34	+1.0
2,982,991	-		Sama_2481	0.34	+0.8
2,982,991	-		Sama_2481	0.34	+1.0
2,982,997	+		Sama_2481	0.35	+0.4
2,982,997	+		Sama_2481	0.35	+0.6
2,982,998	-		Sama_2481	0.36	+1.2
2,983,012	-		Sama_2481	0.39	-1.1
2,983,012	-		Sama_2481	0.39	-0.3
2,983,012	-		Sama_2481	0.39	+1.6
2,983,021	+		Sama_2481	0.41	-2.8
2,983,028	+		Sama_2481	0.43	+0.8
2,983,029	-		Sama_2481	0.43	-0.5
2,983,029	-		Sama_2481	0.43	+2.0
2,983,158	+		Sama_2481	0.72	+0.8
2,983,158	+		Sama_2481	0.72	-0.1
2,983,158	+		Sama_2481	0.72	-0.5
2,983,159	-		Sama_2481	0.73	-1.9
2,983,159	-		Sama_2481	0.73	+0.1
2,983,159	-		Sama_2481	0.73	-0.5
2,983,162	-		Sama_2481	0.73	-0.3
2,983,162	-		Sama_2481	0.73	+0.3
2,983,162	-		Sama_2481	0.73	-1.0
2,983,162	-		Sama_2481	0.73	+0.0
2,983,162	-		Sama_2481	0.73	+1.5
2,983,217	-		Sama_2481	0.86	-0.1
2,983,347	+				+1.5
2,983,435	+				-1.3
2,983,436	-				-1.3
2,983,478	+		Sama_2482	0.12	-3.0
2,983,479	-		Sama_2482	0.12	+0.2
2,983,492	-		Sama_2482	0.14	-2.2
2,983,540	+		Sama_2482	0.22	-0.4
2,983,564	+		Sama_2482	0.26	-1.4
2,983,565	-		Sama_2482	0.26	+0.2
2,983,585	+		Sama_2482	0.29	-0.5
2,983,585	+		Sama_2482	0.29	-0.8
2,983,586	-		Sama_2482	0.30	-1.1
2,983,629	+		Sama_2482	0.37	-1.3
2,983,630	-		Sama_2482	0.37	-2.7
2,983,654	+		Sama_2482	0.41	-1.2
2,983,655	-		Sama_2482	0.41	+1.2
2,983,655	-		Sama_2482	0.41	-0.5
2,983,658	+		Sama_2482	0.42	-0.1
2,983,658	+		Sama_2482	0.42	-1.1
2,983,658	+		Sama_2482	0.42	-0.1
2,983,693	+		Sama_2482	0.48	+1.0
2,983,693	+		Sama_2482	0.48	+0.5
2,983,694	-		Sama_2482	0.48	-0.5
2,983,694	-		Sama_2482	0.48	-1.5
2,983,764	+		Sama_2482	0.59	-1.3
2,983,765	-		Sama_2482	0.60	-0.3
2,983,765	-		Sama_2482	0.60	+0.0
2,983,772	+		Sama_2482	0.61	-2.3
2,983,772	+		Sama_2482	0.61	-0.7
2,983,772	+		Sama_2482	0.61	+1.0
2,983,773	-		Sama_2482	0.61	+0.4
2,983,773	-		Sama_2482	0.61	+1.4
2,983,773	-		Sama_2482	0.61	-0.5
2,983,773	-		Sama_2482	0.61	+0.4
2,983,773	-		Sama_2482	0.61	+0.2
2,983,773	-		Sama_2482	0.61	+0.6
2,983,773	-		Sama_2482	0.61	-0.4
2,983,774	+		Sama_2482	0.61	-2.0
2,983,774	+		Sama_2482	0.61	-1.2
2,983,774	+		Sama_2482	0.61	-1.3
2,983,774	+		Sama_2482	0.61	+0.6
2,983,774	+		Sama_2482	0.61	-0.1
2,983,775	-		Sama_2482	0.61	+0.0
2,983,775	-		Sama_2482	0.61	-2.3
2,983,804	+		Sama_2482	0.66	-1.1
2,983,804	+		Sama_2482	0.66	-0.8
2,983,804	+		Sama_2482	0.66	+0.8
2,983,804	+		Sama_2482	0.66	-0.2
2,984,045	+				-0.5
2,984,046	-				+2.3
2,984,046	-				-0.4
2,984,046	-				-1.7
2,984,092	+				-2.4
2,984,092	+				+0.0
2,984,093	-				+1.0
2,984,175	-		Sama_2483	0.14	+0.5
2,984,188	+		Sama_2483	0.15	+0.9
2,984,188	+		Sama_2483	0.15	+1.0
2,984,188	+		Sama_2483	0.15	+0.3
2,984,189	-		Sama_2483	0.15	-1.0
2,984,189	-		Sama_2483	0.15	+0.0
2,984,195	+		Sama_2483	0.16	-0.7
2,984,196	-		Sama_2483	0.16	-0.8
2,984,266	+		Sama_2483	0.22	+0.9
2,984,266	+		Sama_2483	0.22	-0.5
2,984,267	-		Sama_2483	0.22	-0.5
2,984,267	-		Sama_2483	0.22	+1.9
2,984,267	-		Sama_2483	0.22	-2.4
2,984,269	+		Sama_2483	0.22	+0.5
2,984,270	-		Sama_2483	0.22	-1.2
2,984,298	+		Sama_2483	0.25	+0.3
2,984,298	+		Sama_2483	0.25	+0.3
2,984,299	-		Sama_2483	0.25	+0.2
2,984,299	-		Sama_2483	0.25	-0.3
2,984,391	+		Sama_2483	0.33	+0.4
2,984,417	-		Sama_2483	0.35	-2.4
2,984,556	+		Sama_2483	0.47	-0.8
2,984,556	+		Sama_2483	0.47	+0.6
2,984,556	+		Sama_2483	0.47	+0.8
2,984,557	-		Sama_2483	0.48	-1.5
2,984,557	-		Sama_2483	0.48	+0.6
2,984,557	-		Sama_2483	0.48	+0.8
2,984,575	-		Sama_2483	0.49	-2.3
2,984,597	+		Sama_2483	0.51	+0.0
2,984,598	-		Sama_2483	0.51	-1.3
2,984,620	+		Sama_2483	0.53	+0.3
2,984,620	+		Sama_2483	0.53	+0.4
2,984,621	-		Sama_2483	0.53	-0.2
2,984,675	-		Sama_2483	0.58	+1.2
2,984,675	-		Sama_2483	0.58	-1.3
2,984,678	+		Sama_2483	0.58	-0.7
2,984,678	+		Sama_2483	0.58	-0.4
2,984,679	-		Sama_2483	0.58	+1.0
2,984,679	-		Sama_2483	0.58	+0.1
2,984,679	-		Sama_2483	0.58	-0.1
2,984,679	-		Sama_2483	0.58	-0.5
2,984,679	-		Sama_2483	0.58	+1.2
2,984,723	+		Sama_2483	0.62	+1.8
2,984,723	+		Sama_2483	0.62	+0.9
2,984,723	+		Sama_2483	0.62	-1.8
2,984,724	-		Sama_2483	0.62	-0.4
2,984,724	-		Sama_2483	0.62	-2.1
2,984,724	-		Sama_2483	0.62	-1.3
2,984,738	+		Sama_2483	0.63	+0.5
2,984,767	+		Sama_2483	0.66	-0.4
2,984,768	-		Sama_2483	0.66	-0.1
2,984,777	+		Sama_2483	0.67	+1.0
2,984,778	-		Sama_2483	0.67	-1.3
2,984,796	-		Sama_2483	0.69	-0.1
2,984,855	-		Sama_2483	0.74	-0.5
2,984,872	-		Sama_2483	0.75	-0.1
2,984,906	+		Sama_2483	0.78	+0.7
2,984,907	-		Sama_2483	0.78	-3.0