Strain Fitness in Shewanella amazonensis SB2B around Sama_2418

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
2,909,202	+		Sama_2417	0.64	+0.3
2,909,257	+		Sama_2417	0.66	-0.6
2,909,257	+		Sama_2417	0.66	+1.0
2,909,257	+		Sama_2417	0.66	+0.1
2,909,257	+		Sama_2417	0.66	-1.3
2,909,257	+		Sama_2417	0.66	+0.3
2,909,257	+		Sama_2417	0.66	+0.2
2,909,257	+		Sama_2417	0.66	-1.2
2,909,257	+		Sama_2417	0.66	-1.8
2,909,258	-		Sama_2417	0.66	+0.6
2,909,259	+		Sama_2417	0.66	-0.2
2,909,259	+		Sama_2417	0.66	-2.3
2,909,259	+		Sama_2417	0.66	-1.5
2,909,259	+		Sama_2417	0.66	+0.6
2,909,260	-		Sama_2417	0.66	-0.5
2,909,260	-		Sama_2417	0.66	+0.3
2,909,315	+		Sama_2417	0.69	-0.1
2,909,338	+		Sama_2417	0.70	-0.7
2,909,339	-		Sama_2417	0.70	-3.1
2,909,339	-		Sama_2417	0.70	+0.6
2,909,359	-		Sama_2417	0.71	-0.6
2,909,365	+		Sama_2417	0.71	-1.5
2,909,472	+		Sama_2417	0.76	-1.0
2,909,472	+		Sama_2417	0.76	-1.6
2,909,472	+		Sama_2417	0.76	-1.4
2,909,472	+		Sama_2417	0.76	+0.6
2,909,472	+		Sama_2417	0.76	-1.3
2,909,472	+		Sama_2417	0.76	-1.9
2,909,472	+		Sama_2417	0.76	-1.2
2,909,472	+		Sama_2417	0.76	-1.8
2,909,472	+		Sama_2417	0.76	-0.3
2,909,473	-		Sama_2417	0.76	-0.2
2,909,473	-		Sama_2417	0.76	-0.8
2,909,473	-		Sama_2417	0.76	-0.6
2,909,473	-		Sama_2417	0.76	-0.5
2,909,473	-		Sama_2417	0.76	-1.6
2,909,501	-		Sama_2417	0.77	-0.1
2,909,532	+		Sama_2417	0.79	+0.6
2,909,532	+		Sama_2417	0.79	-0.4
2,909,567	+		Sama_2417	0.80	-0.2
2,909,567	+		Sama_2417	0.80	-2.3
2,909,567	+		Sama_2417	0.80	-1.2
2,909,567	+		Sama_2417	0.80	+0.3
2,909,568	-		Sama_2417	0.81	+0.2
2,909,568	-		Sama_2417	0.81	-1.8
2,909,568	-		Sama_2417	0.81	-1.6
2,909,568	-		Sama_2417	0.81	+0.8
2,909,571	+		Sama_2417	0.81	+0.5
2,909,572	-		Sama_2417	0.81	-1.8
2,909,572	-		Sama_2417	0.81	+0.4
2,909,572	-		Sama_2417	0.81	-0.1
2,909,572	-		Sama_2417	0.81	-0.2
2,909,572	-		Sama_2417	0.81	+0.1
2,909,575	-		Sama_2417	0.81	-1.2
2,909,575	-		Sama_2417	0.81	+0.0
2,909,588	-		Sama_2417	0.81	-1.0
2,909,595	+		Sama_2417	0.82	+0.2
2,909,596	-		Sama_2417	0.82	+1.0
2,909,611	+		Sama_2417	0.83	-1.6
2,909,611	+		Sama_2417	0.83	+1.6
2,909,611	+		Sama_2417	0.83	-1.4
2,909,611	+		Sama_2417	0.83	-1.0
2,909,611	+		Sama_2417	0.83	+0.9
2,909,611	+		Sama_2417	0.83	-1.6
2,909,612	-		Sama_2417	0.83	-0.4
2,909,612	-		Sama_2417	0.83	-1.1
2,909,612	-		Sama_2417	0.83	-0.6
2,909,612	-		Sama_2417	0.83	+0.5
2,909,612	-		Sama_2417	0.83	+0.3
2,909,612	-		Sama_2417	0.83	+0.6
2,909,689	+		Sama_2417	0.86	-0.6
2,909,690	-		Sama_2417	0.86	-0.4
2,909,692	+		Sama_2417	0.86	-1.2
2,909,743	+		Sama_2417	0.89	+0.5
2,909,743	+		Sama_2417	0.89	-0.3
2,909,743	+		Sama_2417	0.89	+0.0
2,909,743	+		Sama_2417	0.89	+0.6
2,909,744	-		Sama_2417	0.89	+0.3
2,909,744	-		Sama_2417	0.89	+0.8
2,909,745	+		Sama_2417	0.89	-1.8
2,909,745	+		Sama_2417	0.89	-2.1
2,909,745	+		Sama_2417	0.89	-0.6
2,909,745	+		Sama_2417	0.89	-1.0
2,909,745	+		Sama_2417	0.89	-0.6
2,909,745	+		Sama_2417	0.89	+0.6
2,909,745	+		Sama_2417	0.89	-2.6
2,909,745	+		Sama_2417	0.89	-0.5
2,909,745	+		Sama_2417	0.89	-0.4
2,909,745	+		Sama_2417	0.89	-0.4
2,909,745	+		Sama_2417	0.89	+0.1
2,909,745	+		Sama_2417	0.89	+0.0
2,909,745	+		Sama_2417	0.89	-0.4
2,909,745	+		Sama_2417	0.89	-0.5
2,909,745	+		Sama_2417	0.89	+2.6
2,909,746	-		Sama_2417	0.89	+0.5
2,909,746	-		Sama_2417	0.89	-0.8
2,909,746	-		Sama_2417	0.89	+0.4
2,909,746	-		Sama_2417	0.89	+0.4
2,909,746	-		Sama_2417	0.89	-2.3
2,909,746	-		Sama_2417	0.89	+0.4
2,909,746	-		Sama_2417	0.89	-0.3
2,909,746	-		Sama_2417	0.89	-1.9
2,909,746	-		Sama_2417	0.89	-0.7
2,909,746	-		Sama_2417	0.89	+3.6
2,909,746	-		Sama_2417	0.89	-2.9
2,909,746	-		Sama_2417	0.89	-0.1
2,909,751	+		Sama_2417	0.89	+0.4
2,909,751	+		Sama_2417	0.89	-0.0
2,909,751	+		Sama_2417	0.89	+0.2
2,909,752	-		Sama_2417	0.89	-2.7
2,909,804	+				-1.3
2,909,805	-				-1.6
2,909,805	-				-0.6
2,909,805	-				+0.9
2,909,805	-				-1.2
2,909,814	+				-1.1
2,909,814	+				+0.4
2,909,815	-				+0.1
2,909,861	+				-0.8
2,909,861	+				-0.8
2,909,861	+				-0.8
2,909,861	+				+0.1
2,909,862	-				+0.9
2,909,866	-				-2.6
2,909,866	-				-1.9
2,909,866	-				+0.7
2,909,866	-				-0.4
2,909,926	+				-1.3
2,909,926	+				+0.7
2,909,927	-				-0.4
2,909,977	-				-2.3
2,909,980	+				+0.4
2,909,981	-				+1.8
2,910,001	+				-3.1
2,910,002	-				+0.1
2,910,023	+				-0.4
2,910,023	+				-0.0
2,910,024	-				-0.6
2,910,167	-				+0.8
2,910,182	-				-0.9
2,910,319	+		Sama_2418	0.12	+1.3
2,910,320	-		Sama_2418	0.12	-0.3
2,910,335	+		Sama_2418	0.13	+1.7
2,910,336	-		Sama_2418	0.13	+1.4
2,910,340	-		Sama_2418	0.14	+1.0
2,910,340	-		Sama_2418	0.14	-1.0
2,910,340	-		Sama_2418	0.14	+0.4
2,910,368	+		Sama_2418	0.15	-0.5
2,910,402	+		Sama_2418	0.18	-2.5
2,910,403	-		Sama_2418	0.18	-1.0
2,910,455	-		Sama_2418	0.21	+1.1
2,910,455	-		Sama_2418	0.21	-2.6
2,910,455	-		Sama_2418	0.21	+0.2
2,910,457	+		Sama_2418	0.21	-0.8
2,910,514	-		Sama_2418	0.25	+0.4
2,910,558	+		Sama_2418	0.28	-2.0
2,910,558	+		Sama_2418	0.28	-0.2
2,910,558	+		Sama_2418	0.28	-0.0
2,910,558	+		Sama_2418	0.28	-0.9
2,910,558	+		Sama_2418	0.28	-0.0
2,910,559	-		Sama_2418	0.28	-1.0
2,910,559	-		Sama_2418	0.28	+2.2
2,910,559	-		Sama_2418	0.28	-0.2
2,910,559	-		Sama_2418	0.28	+0.8
2,910,559	-		Sama_2418	0.28	+0.4
2,910,559	-		Sama_2418	0.28	-1.7
2,910,561	-		Sama_2418	0.28	-0.3
2,910,561	-		Sama_2418	0.28	-0.4
2,910,601	+		Sama_2418	0.30	+2.0
2,910,602	-		Sama_2418	0.30	-0.3
2,910,602	-		Sama_2418	0.30	+1.0
2,910,602	-		Sama_2418	0.30	-0.2
2,910,602	-		Sama_2418	0.30	-1.7
2,910,618	-		Sama_2418	0.31	-0.8
2,910,757	+		Sama_2418	0.40	+0.1
2,910,758	-		Sama_2418	0.40	+1.0
2,910,758	-		Sama_2418	0.40	+0.5
2,910,784	-		Sama_2418	0.42	+0.2
2,910,784	-		Sama_2418	0.42	-3.5
2,910,794	-		Sama_2418	0.43	+1.2
2,910,794	-		Sama_2418	0.43	-0.2
2,910,794	-		Sama_2418	0.43	+0.5
2,910,812	+		Sama_2418	0.44	-0.4
2,910,852	+		Sama_2418	0.46	+0.1
2,910,852	+		Sama_2418	0.46	+3.0
2,910,852	+		Sama_2418	0.46	-2.3
2,910,852	+		Sama_2418	0.46	+1.5
2,910,853	-		Sama_2418	0.46	-0.8
2,910,903	+		Sama_2418	0.50	-0.0
2,910,903	+		Sama_2418	0.50	-0.5
2,910,903	+		Sama_2418	0.50	-0.4
2,910,903	+		Sama_2418	0.50	-1.0
2,910,903	+		Sama_2418	0.50	+1.0
2,910,904	-		Sama_2418	0.50	+0.3
2,910,904	-		Sama_2418	0.50	-0.6
2,910,904	-		Sama_2418	0.50	+1.3
2,910,904	-		Sama_2418	0.50	-1.2
2,910,905	+		Sama_2418	0.50	+1.0
2,910,905	+		Sama_2418	0.50	+0.4
2,910,906	-		Sama_2418	0.50	+0.7
2,910,911	+		Sama_2418	0.50	+0.3
2,910,912	-		Sama_2418	0.50	+0.0
2,910,912	-		Sama_2418	0.50	+1.4
2,910,912	-		Sama_2418	0.50	-2.2
2,910,971	+		Sama_2418	0.54	+0.1
2,910,988	+		Sama_2418	0.55	+1.0
2,911,010	+		Sama_2418	0.57	+1.6
2,911,010	+		Sama_2418	0.57	-2.8
2,911,010	+		Sama_2418	0.57	-1.5
2,911,164	+		Sama_2418	0.66	-0.2
2,911,164	+		Sama_2418	0.66	-2.0
2,911,165	-		Sama_2418	0.67	+0.8
2,911,166	+		Sama_2418	0.67	+1.8
2,911,166	+		Sama_2418	0.67	-0.1
2,911,166	+		Sama_2418	0.67	-2.0
2,911,167	-		Sama_2418	0.67	+0.3
2,911,167	-		Sama_2418	0.67	-0.3
2,911,202	-		Sama_2418	0.69	+1.2
2,911,209	-		Sama_2418	0.69	+0.2
2,911,283	+		Sama_2418	0.74	-1.2
2,911,283	+		Sama_2418	0.74	+0.1
2,911,284	-		Sama_2418	0.74	+1.1
2,911,284	-		Sama_2418	0.74	+0.2
2,911,315	+		Sama_2418	0.76	+0.3
2,911,315	+		Sama_2418	0.76	+1.1
2,911,315	+		Sama_2418	0.76	-0.0
2,911,316	-		Sama_2418	0.76	+0.7
2,911,316	-		Sama_2418	0.76	+0.4
2,911,341	-		Sama_2418	0.78	+1.4
2,911,381	+		Sama_2418	0.80	+1.4
2,911,382	-		Sama_2418	0.80	-0.6
2,911,469	-		Sama_2418	0.86	+0.7
2,911,469	-		Sama_2418	0.86	+1.6
2,911,469	-		Sama_2418	0.86	+0.9
2,911,476	-		Sama_2418	0.87	-0.2
2,911,483	+		Sama_2418	0.87	+0.0
2,911,484	-		Sama_2418	0.87	-0.0
2,911,516	+		Sama_2418	0.89	-0.1
2,911,553	+				+0.5
2,911,553	+				-0.4
2,911,553	+				-0.2
2,911,560	-				-1.3
2,911,639	-				-0.9
2,911,639	-				-0.3
2,911,684	-				-2.2
2,911,684	-				+0.7
2,911,699	+				+1.6
2,911,699	+				-0.1
2,911,731	+				-0.9
2,911,731	+				-0.3
2,911,731	+				+0.5
2,911,732	-				-2.3
2,911,732	-				-0.1
2,911,732	-				-1.0
2,911,732	-				+0.4
2,911,736	+				-1.3
2,911,736	+				+0.2
2,911,737	-				+1.5
2,911,758	+				-0.8
2,911,759	-				-0.0
2,911,759	-				+0.8
2,911,823	-				-0.3
2,911,823	-				+0.4
2,911,823	-				+2.0
2,911,904	-		Sama_2419	0.13	-1.7
2,911,924	-		Sama_2419	0.14	+0.3
2,911,959	+		Sama_2419	0.17	+0.4
2,911,959	+		Sama_2419	0.17	-0.8
2,911,960	-		Sama_2419	0.17	-0.3
2,911,960	-		Sama_2419	0.17	-0.6
2,911,960	-		Sama_2419	0.17	+0.3
2,911,960	-		Sama_2419	0.17	-0.3
2,912,047	+		Sama_2419	0.23	-0.2
2,912,048	-		Sama_2419	0.23	-2.6
2,912,062	+		Sama_2419	0.24	-0.5
2,912,062	+		Sama_2419	0.24	+2.9
2,912,062	+		Sama_2419	0.24	+0.7
2,912,063	-		Sama_2419	0.24	-1.0
2,912,063	-		Sama_2419	0.24	+0.4
2,912,063	-		Sama_2419	0.24	+0.5
2,912,063	-		Sama_2419	0.24	+2.0
2,912,063	-		Sama_2419	0.24	+1.2
2,912,125	-		Sama_2419	0.29	-0.8
2,912,196	+		Sama_2419	0.34	-1.0
2,912,197	-		Sama_2419	0.34	-0.4
2,912,197	-		Sama_2419	0.34	-0.0
2,912,197	-		Sama_2419	0.34	+0.7
2,912,197	-		Sama_2419	0.34	+1.2
2,912,213	-		Sama_2419	0.35	-1.8
2,912,218	+		Sama_2419	0.36	-0.6
2,912,236	+		Sama_2419	0.37	-0.3
2,912,263	-		Sama_2419	0.39	-0.8
2,912,337	+		Sama_2419	0.45	+1.1
2,912,337	+		Sama_2419	0.45	-0.3
2,912,337	+		Sama_2419	0.45	-2.0
2,912,337	+		Sama_2419	0.45	+0.7
2,912,338	-		Sama_2419	0.45	-1.6
2,912,338	-		Sama_2419	0.45	+1.0
2,912,338	-		Sama_2419	0.45	+1.0
2,912,338	-		Sama_2419	0.45	+0.2
2,912,353	+		Sama_2419	0.46	+1.0
2,912,354	-		Sama_2419	0.46	+0.8
2,912,354	-		Sama_2419	0.46	-2.2
2,912,354	-		Sama_2419	0.46	-0.8
2,912,354	-		Sama_2419	0.46	+0.1
2,912,354	-		Sama_2419	0.46	-0.7
2,912,354	-		Sama_2419	0.46	-2.4
2,912,376	+		Sama_2419	0.47	-0.1
2,912,379	+		Sama_2419	0.48	-0.2
2,912,423	+		Sama_2419	0.51	-0.6
2,912,424	-		Sama_2419	0.51	-2.0
2,912,477	+		Sama_2419	0.55	+0.2
2,912,478	-		Sama_2419	0.55	+1.4
2,912,521	+		Sama_2419	0.58	+0.5
2,912,521	+		Sama_2419	0.58	-0.0
2,912,522	-		Sama_2419	0.58	+0.0
2,912,522	-		Sama_2419	0.58	+1.1
2,912,522	-		Sama_2419	0.58	-0.4
2,912,522	-		Sama_2419	0.58	-0.6
2,912,522	-		Sama_2419	0.58	-1.0
2,912,525	+		Sama_2419	0.58	-0.8
2,912,533	-		Sama_2419	0.59	+0.1
2,912,533	-		Sama_2419	0.59	+1.1
2,912,534	+		Sama_2419	0.59	-0.5
2,912,535	-		Sama_2419	0.59	-0.2
2,912,561	+		Sama_2419	0.61	-1.5
2,912,561	+		Sama_2419	0.61	+0.5
2,912,561	+		Sama_2419	0.61	-0.6
2,912,561	+		Sama_2419	0.61	+0.8
2,912,562	-		Sama_2419	0.61	-1.6
2,912,562	-		Sama_2419	0.61	-2.0
2,912,562	-		Sama_2419	0.61	-1.1
2,912,562	-		Sama_2419	0.61	-1.3
2,912,576	+		Sama_2419	0.62	+0.8
2,912,577	-		Sama_2419	0.62	+1.1
2,912,606	-		Sama_2419	0.64	+0.1
2,912,606	-		Sama_2419	0.64	+1.7
2,912,606	-		Sama_2419	0.64	+1.4
2,912,606	-		Sama_2419	0.64	-0.6
2,912,661	+		Sama_2419	0.69	+0.3
2,912,662	-		Sama_2419	0.69	+0.7
2,912,662	-		Sama_2419	0.69	-3.0
2,912,662	-		Sama_2419	0.69	+0.8
2,912,662	-		Sama_2419	0.69	-1.1
2,912,665	+		Sama_2419	0.69	+0.3