Strain Fitness in Shewanella amazonensis SB2B around Sama_2206

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
2,663,145	+		Sama_2205	0.48	-1.9
2,663,146	-		Sama_2205	0.48	-0.3
2,663,175	+		Sama_2205	0.50	-1.3
2,663,232	+		Sama_2205	0.54	-3.5
2,663,232	+		Sama_2205	0.54	+1.0
2,663,413	+		Sama_2205	0.67	-0.7
2,663,413	+		Sama_2205	0.67	-0.5
2,663,413	+		Sama_2205	0.67	-2.4
2,663,414	-		Sama_2205	0.67	+0.2
2,663,414	-		Sama_2205	0.67	-0.7
2,663,454	-		Sama_2205	0.70	-0.9
2,663,469	+		Sama_2205	0.71	-1.4
2,663,469	+		Sama_2205	0.71	-2.5
2,663,469	+		Sama_2205	0.71	-1.6
2,663,470	-		Sama_2205	0.71	-0.1
2,663,488	+		Sama_2205	0.72	-0.0
2,663,489	-		Sama_2205	0.72	-0.9
2,663,489	-		Sama_2205	0.72	-0.5
2,663,518	+		Sama_2205	0.74	-1.8
2,663,518	+		Sama_2205	0.74	-0.8
2,663,518	+		Sama_2205	0.74	-0.9
2,663,519	-		Sama_2205	0.74	-0.7
2,663,593	+		Sama_2205	0.79	+0.2
2,663,593	+		Sama_2205	0.79	-3.5
2,663,593	+		Sama_2205	0.79	-2.0
2,663,593	+		Sama_2205	0.79	-1.5
2,663,594	-		Sama_2205	0.79	-1.0
2,663,608	+		Sama_2205	0.80	-2.1
2,663,608	+		Sama_2205	0.80	-2.7
2,663,644	-		Sama_2205	0.83	+0.1
2,663,779	-				-0.2
2,663,779	-				-0.1
2,663,789	+				-1.0
2,663,789	+				-1.5
2,663,914	+				-3.6
2,663,914	+				-0.6
2,663,915	-				+0.9
2,663,915	-				+0.1
2,663,915	-				+0.3
2,663,920	+				-2.7
2,663,921	-				-2.6
2,663,931	+				-2.1
2,663,931	+				-1.1
2,663,931	+				-4.5
2,663,931	+				-1.5
2,663,932	-				+0.5
2,664,004	-				+0.3
2,664,004	-				+0.0
2,664,019	+				-3.4
2,664,019	+				-3.0
2,664,054	+				-3.8
2,664,054	+				-2.3
2,664,055	-				+0.6
2,664,055	-				+0.6
2,664,063	+				-1.1
2,664,063	+				-2.3
2,664,097	+				-0.1
2,664,097	+				-0.8
2,664,098	-				+0.7
2,664,103	+				-2.3
2,664,104	-				+0.3
2,664,104	-				-0.7
2,664,197	+				-0.1
2,664,197	+				+0.3
2,664,197	+				-0.1
2,664,197	+				+4.2
2,664,198	-				+3.2
2,664,198	-				-2.6
2,664,198	-				+0.9
2,664,199	+				-0.1
2,664,200	-				+0.7
2,664,267	+				+1.2
2,664,267	+				-1.3
2,664,283	+		Sama_2206	0.10	+0.5
2,664,376	-		Sama_2206	0.15	-1.4
2,664,422	+		Sama_2206	0.18	+1.3
2,664,443	+		Sama_2206	0.19	+1.5
2,664,443	+		Sama_2206	0.19	+0.5
2,664,443	+		Sama_2206	0.19	+3.2
2,664,444	-		Sama_2206	0.19	+1.6
2,664,503	+		Sama_2206	0.22	+1.0
2,664,599	+		Sama_2206	0.27	-0.1
2,664,599	+		Sama_2206	0.27	+0.4
2,664,601	+		Sama_2206	0.27	-1.1
2,664,602	-		Sama_2206	0.27	+0.3
2,664,612	-		Sama_2206	0.28	+2.9
2,664,675	+		Sama_2206	0.31	+0.2
2,664,676	-		Sama_2206	0.31	+0.8
2,664,689	+		Sama_2206	0.32	+1.3
2,664,689	+		Sama_2206	0.32	+1.0
2,664,689	+		Sama_2206	0.32	-0.9
2,664,689	+		Sama_2206	0.32	+1.2
2,664,689	+		Sama_2206	0.32	+0.1
2,664,689	+		Sama_2206	0.32	+1.7
2,664,690	-		Sama_2206	0.32	-2.1
2,664,788	+		Sama_2206	0.38	+1.1
2,664,788	+		Sama_2206	0.38	-2.1
2,664,788	+		Sama_2206	0.38	-0.2
2,664,788	+		Sama_2206	0.38	+3.1
2,664,788	+		Sama_2206	0.38	-1.5
2,664,788	+		Sama_2206	0.38	-0.1
2,664,788	+		Sama_2206	0.38	+1.0
2,664,789	-		Sama_2206	0.38	+0.4
2,664,789	-		Sama_2206	0.38	-0.1
2,664,789	-		Sama_2206	0.38	-0.5
2,664,791	-		Sama_2206	0.38	+0.5
2,664,791	-		Sama_2206	0.38	-0.1
2,664,797	-		Sama_2206	0.38	+0.7
2,664,797	-		Sama_2206	0.38	+1.5
2,664,797	-		Sama_2206	0.38	-1.1
2,664,843	-		Sama_2206	0.41	+1.3
2,664,879	+		Sama_2206	0.42	+0.7
2,664,879	+		Sama_2206	0.42	-0.8
2,664,879	+		Sama_2206	0.42	+0.6
2,664,879	+		Sama_2206	0.42	-0.2
2,664,879	+		Sama_2206	0.42	+0.4
2,664,879	+		Sama_2206	0.42	-0.4
2,664,879	+		Sama_2206	0.42	+0.3
2,664,879	+		Sama_2206	0.42	+2.7
2,664,879	+		Sama_2206	0.42	+0.5
2,664,879	+		Sama_2206	0.42	-1.1
2,664,880	-		Sama_2206	0.43	+1.8
2,664,880	-		Sama_2206	0.43	-0.8
2,664,880	-		Sama_2206	0.43	+0.3
2,664,880	-		Sama_2206	0.43	+0.6
2,664,910	+		Sama_2206	0.44	+0.5
2,664,921	+		Sama_2206	0.45	+0.5
2,664,921	+		Sama_2206	0.45	-0.3
2,664,922	-		Sama_2206	0.45	+1.5
2,664,922	-		Sama_2206	0.45	-2.5
2,664,935	+		Sama_2206	0.46	-0.1
2,664,935	+		Sama_2206	0.46	-0.6
2,664,935	+		Sama_2206	0.46	-2.8
2,664,935	+		Sama_2206	0.46	-0.4
2,664,935	+		Sama_2206	0.46	+1.7
2,664,935	+		Sama_2206	0.46	-0.1
2,664,936	-		Sama_2206	0.46	-1.1
2,664,936	-		Sama_2206	0.46	-0.6
2,664,936	-		Sama_2206	0.46	+0.9
2,664,936	-		Sama_2206	0.46	-1.3
2,664,936	-		Sama_2206	0.46	+0.3
2,664,936	-		Sama_2206	0.46	+0.5
2,664,999	+		Sama_2206	0.49	-1.2
2,664,999	+		Sama_2206	0.49	-0.1
2,664,999	+		Sama_2206	0.49	-0.5
2,664,999	+		Sama_2206	0.49	-1.7
2,665,000	-		Sama_2206	0.49	-1.5
2,665,000	-		Sama_2206	0.49	+4.1
2,665,000	-		Sama_2206	0.49	+2.0
2,665,000	-		Sama_2206	0.49	+1.5
2,665,045	+		Sama_2206	0.51	+1.9
2,665,046	-		Sama_2206	0.52	+1.7
2,665,046	-		Sama_2206	0.52	-0.9
2,665,092	+		Sama_2206	0.54	+0.7
2,665,092	+		Sama_2206	0.54	+0.3
2,665,092	+		Sama_2206	0.54	+1.1
2,665,092	+		Sama_2206	0.54	-0.1
2,665,093	-		Sama_2206	0.54	-0.5
2,665,093	-		Sama_2206	0.54	+0.6
2,665,186	+		Sama_2206	0.59	-0.3
2,665,186	+		Sama_2206	0.59	-0.7
2,665,187	-		Sama_2206	0.59	+0.3
2,665,187	-		Sama_2206	0.59	-1.3
2,665,193	+		Sama_2206	0.60	+1.4
2,665,194	-		Sama_2206	0.60	+0.1
2,665,194	-		Sama_2206	0.60	+1.5
2,665,214	+		Sama_2206	0.61	+0.4
2,665,304	-		Sama_2206	0.66	-0.0
2,665,337	+		Sama_2206	0.67	+0.8
2,665,337	+		Sama_2206	0.67	+0.1
2,665,338	-		Sama_2206	0.67	-0.7
2,665,359	+		Sama_2206	0.69	-1.3
2,665,359	+		Sama_2206	0.69	-1.1
2,665,435	+		Sama_2206	0.73	-0.0
2,665,436	-		Sama_2206	0.73	+1.4
2,665,456	+		Sama_2206	0.74	+0.6
2,665,456	+		Sama_2206	0.74	-1.3
2,665,456	+		Sama_2206	0.74	+2.3
2,665,457	-		Sama_2206	0.74	+0.1
2,665,468	+		Sama_2206	0.74	+1.5
2,665,468	+		Sama_2206	0.74	+1.3
2,665,469	-		Sama_2206	0.75	-1.3
2,665,510	+		Sama_2206	0.77	+1.9
2,665,510	+		Sama_2206	0.77	-0.7
2,665,510	+		Sama_2206	0.77	+0.4
2,665,511	-		Sama_2206	0.77	+1.0
2,665,608	+		Sama_2206	0.82	+0.5
2,665,608	+		Sama_2206	0.82	+0.2
2,665,608	+		Sama_2206	0.82	-1.9
2,665,608	+		Sama_2206	0.82	-0.5
2,665,609	-		Sama_2206	0.82	-0.1
2,665,609	-		Sama_2206	0.82	+0.6
2,665,672	+		Sama_2206	0.86	-3.0
2,665,672	+		Sama_2206	0.86	+0.9
2,665,740	+		Sama_2206	0.89	-0.2
2,665,740	+		Sama_2206	0.89	+0.7
2,665,741	-		Sama_2206	0.89	+0.8
2,665,741	-		Sama_2206	0.89	+0.5
2,665,741	-		Sama_2206	0.89	+1.3
2,665,741	-		Sama_2206	0.89	+0.0
2,665,742	+		Sama_2206	0.89	-0.1
2,665,743	-		Sama_2206	0.89	-0.8
2,665,750	-		Sama_2206	0.90	-0.6
2,665,788	+				-2.8
2,665,816	+				+1.2
2,665,817	-				+0.4
2,665,842	+				+0.8
2,665,842	+				-0.1
2,665,843	-				+0.9
2,665,882	+				+0.1
2,665,882	+				+1.5
2,665,885	-				+1.3
2,665,886	+				+0.2
2,665,886	+				+0.9
2,665,886	+				+0.3
2,665,886	+				+2.5
2,665,886	+				+0.2
2,665,886	+				+0.1
2,665,886	+				+0.6
2,665,886	+				+0.7
2,665,886	+				-2.5
2,665,886	+				-0.1
2,665,887	-				+0.9
2,665,887	-				+1.0
2,665,887	-				+0.3
2,665,887	-				-1.0
2,665,887	-				+1.6
2,665,934	+				+0.4
2,665,935	-				+0.2
2,665,941	+				+0.9
2,665,997	-				+0.9
2,666,006	+				+2.1
2,666,016	-				-0.4
2,666,016	-				+1.9
2,666,016	-				-0.1
2,666,038	+				-2.3
2,666,038	+				+0.6
2,666,039	-				+0.9
2,666,039	-				-1.5
2,666,041	+				-0.9
2,666,049	+				+1.0
2,666,050	-				-1.7
2,666,050	-				+1.4
2,666,073	-				-0.5
2,666,073	-				-0.9
2,666,106	+				+0.6
2,666,106	+				+0.5
2,666,106	+				-0.3
2,666,106	+				-2.5
2,666,107	-				-1.9
2,666,110	+				-1.5
2,666,148	+				-2.4
2,666,149	-				-1.1
2,666,191	+				-0.7
2,666,234	+				+0.2
2,666,234	+				-0.2
2,666,234	+				-1.5
2,666,235	-				+1.1
2,666,246	+				+0.7
2,666,266	+				-0.9
2,666,266	+				+0.7
2,666,266	+				-1.7
2,666,266	+				+1.7
2,666,266	+				-1.1
2,666,266	+				+1.0
2,666,267	-				+0.5
2,666,267	-				+0.6
2,666,270	+				+0.2
2,666,270	+				-1.1
2,666,270	+				-0.5
2,666,270	+				-1.4
2,666,271	-				-1.1
2,666,271	-				-0.1
2,666,296	-				+0.3
2,666,323	-		Sama_R0087	0.13	-0.5
2,666,323	-		Sama_R0087	0.13	+2.9
2,666,936	-				-1.1