Strain Fitness in Shewanella amazonensis SB2B around Sama_1398

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
1,693,652	-		Sama_1397	0.70	-0.4
1,693,796	+		Sama_1397	0.75	-0.5
1,693,797	-		Sama_1397	0.75	+0.3
1,693,799	+		Sama_1397	0.75	-1.8
1,693,799	+		Sama_1397	0.75	+0.8
1,693,799	+		Sama_1397	0.75	+0.5
1,693,799	+		Sama_1397	0.75	-1.2
1,693,800	-		Sama_1397	0.75	-0.3
1,693,800	-		Sama_1397	0.75	+0.8
1,693,800	-		Sama_1397	0.75	-0.6
1,693,803	-		Sama_1397	0.75	+0.3
1,693,803	-		Sama_1397	0.75	-2.9
1,693,817	+		Sama_1397	0.76	-2.5
1,693,856	+		Sama_1397	0.77	-0.4
1,693,856	+		Sama_1397	0.77	-0.3
1,693,856	+		Sama_1397	0.77	-0.9
1,693,856	+		Sama_1397	0.77	-0.9
1,693,856	+		Sama_1397	0.77	-1.8
1,693,856	+		Sama_1397	0.77	-0.9
1,693,856	+		Sama_1397	0.77	+0.1
1,693,856	+		Sama_1397	0.77	-0.9
1,693,856	+		Sama_1397	0.77	-0.8
1,693,856	+		Sama_1397	0.77	+0.1
1,693,856	+		Sama_1397	0.77	-0.5
1,693,856	+		Sama_1397	0.77	-2.0
1,693,856	+		Sama_1397	0.77	+1.8
1,693,856	+		Sama_1397	0.77	-0.1
1,693,856	+		Sama_1397	0.77	+0.1
1,693,856	+		Sama_1397	0.77	+1.4
1,693,856	+		Sama_1397	0.77	-2.9
1,693,856	+		Sama_1397	0.77	+0.8
1,693,856	+		Sama_1397	0.77	-1.0
1,693,856	+		Sama_1397	0.77	-0.4
1,693,856	+		Sama_1397	0.77	+0.2
1,693,856	+		Sama_1397	0.77	-0.3
1,693,857	-		Sama_1397	0.77	+0.6
1,693,857	-		Sama_1397	0.77	+0.7
1,693,857	-		Sama_1397	0.77	-1.1
1,693,857	-		Sama_1397	0.77	+0.0
1,693,857	-		Sama_1397	0.77	-1.8
1,693,857	-		Sama_1397	0.77	-0.2
1,693,857	-		Sama_1397	0.77	+0.4
1,693,857	-		Sama_1397	0.77	+0.6
1,693,857	-		Sama_1397	0.77	-2.8
1,693,857	-		Sama_1397	0.77	+1.0
1,693,857	-		Sama_1397	0.77	-1.8
1,693,857	-		Sama_1397	0.77	+0.2
1,693,857	-		Sama_1397	0.77	+0.7
1,693,857	-		Sama_1397	0.77	+2.8
1,693,857	-		Sama_1397	0.77	-1.2
1,693,857	-		Sama_1397	0.77	-1.2
1,693,857	-		Sama_1397	0.77	-0.3
1,693,857	-		Sama_1397	0.77	+1.5
1,693,857	-		Sama_1397	0.77	-1.3
1,693,857	-		Sama_1397	0.77	-0.4
1,693,857	-		Sama_1397	0.77	-0.6
1,693,857	-		Sama_1397	0.77	-0.2
1,693,857	-		Sama_1397	0.77	+0.2
1,693,857	-		Sama_1397	0.77	-3.0
1,693,907	+		Sama_1397	0.79	-1.8
1,693,907	+		Sama_1397	0.79	-2.3
1,693,907	+		Sama_1397	0.79	+1.2
1,693,907	+		Sama_1397	0.79	-1.3
1,693,909	+		Sama_1397	0.79	+0.6
1,693,909	+		Sama_1397	0.79	-1.6
1,693,957	+		Sama_1397	0.80	+0.4
1,693,957	+		Sama_1397	0.80	+0.2
1,693,957	+		Sama_1397	0.80	-1.6
1,693,957	+		Sama_1397	0.80	-0.5
1,693,958	-		Sama_1397	0.80	-1.2
1,693,958	-		Sama_1397	0.80	+0.1
1,693,958	-		Sama_1397	0.80	+0.5
1,694,058	+		Sama_1397	0.84	-1.9
1,694,058	+		Sama_1397	0.84	+0.3
1,694,059	-		Sama_1397	0.84	+0.4
1,694,059	-		Sama_1397	0.84	+0.8
1,694,080	+		Sama_1397	0.84	+0.3
1,694,080	+		Sama_1397	0.84	-1.2
1,694,081	-		Sama_1397	0.84	-1.5
1,694,109	+		Sama_1397	0.85	+0.0
1,694,110	-		Sama_1397	0.85	+0.0
1,694,110	-		Sama_1397	0.85	-0.8
1,694,130	+		Sama_1397	0.86	+1.6
1,694,131	-		Sama_1397	0.86	-1.5
1,694,162	-		Sama_1397	0.87	-2.2
1,694,192	+		Sama_1397	0.88	-2.0
1,694,193	-		Sama_1397	0.88	+0.1
1,694,201	+		Sama_1397	0.88	+3.2
1,694,201	+		Sama_1397	0.88	+0.8
1,694,202	-		Sama_1397	0.88	+1.3
1,694,203	+		Sama_1397	0.88	+0.8
1,694,203	+		Sama_1397	0.88	-0.6
1,694,204	-		Sama_1397	0.88	-0.3
1,694,264	+				-1.4
1,694,264	+				+1.0
1,694,297	+				+1.2
1,694,297	+				+0.5
1,694,298	-				-1.8
1,694,315	+				+2.1
1,694,315	+				-0.3
1,694,315	+				+0.5
1,694,316	-				-2.2
1,694,401	+				+0.0
1,694,401	+				+0.0
1,694,401	+				+1.6
1,694,402	-				-0.9
1,694,402	-				-0.1
1,694,402	-				-3.1
1,694,402	-				-0.8
1,694,405	+				-0.2
1,694,405	+				-1.2
1,694,406	-				+1.8
1,694,406	-				+0.6
1,694,446	-				+0.5
1,694,552	+				+0.8
1,694,553	-				-0.9
1,694,558	+				+0.4
1,694,558	+				-0.5
1,694,565	+				-0.5
1,694,576	+				-1.0
1,694,576	+				+0.5
1,694,669	+				+0.7
1,694,670	-				-0.3
1,694,670	-				-1.6
1,694,680	-				+0.2
1,694,680	-				-0.0
1,694,708	+				-0.3
1,694,709	-				-0.2
1,694,853	-		Sama_1398	0.27	-1.1
1,694,853	-		Sama_1398	0.27	+1.2
1,694,884	+		Sama_1398	0.31	-2.3
1,694,884	+		Sama_1398	0.31	-0.2
1,695,131	+		Sama_1398	0.62	-0.5
1,695,132	-		Sama_1398	0.62	-0.5
1,695,132	-		Sama_1398	0.62	-0.8
1,695,197	+		Sama_1398	0.70	+0.2
1,695,197	+		Sama_1398	0.70	-1.2
1,695,217	+		Sama_1398	0.73	+1.0
1,695,218	-		Sama_1398	0.73	-0.5
1,695,218	-		Sama_1398	0.73	-1.9
1,695,260	+		Sama_1398	0.78	+0.8
1,695,260	+		Sama_1398	0.78	+0.7
1,695,260	+		Sama_1398	0.78	-1.6
1,695,260	+		Sama_1398	0.78	-0.1
1,695,260	+		Sama_1398	0.78	+0.8
1,695,260	+		Sama_1398	0.78	-0.5
1,695,261	-		Sama_1398	0.78	+0.2
1,695,261	-		Sama_1398	0.78	-0.2
1,695,261	-		Sama_1398	0.78	+1.4
1,695,261	-		Sama_1398	0.78	-0.1
1,695,261	-		Sama_1398	0.78	-2.3
1,695,261	-		Sama_1398	0.78	+0.3
1,695,306	+		Sama_1398	0.84	-2.3
1,695,307	-		Sama_1398	0.84	+1.0
1,695,307	-		Sama_1398	0.84	+0.0
1,695,314	+		Sama_1398	0.85	-0.8
1,695,314	+		Sama_1398	0.85	+0.3
1,695,314	+		Sama_1398	0.85	+0.8
1,695,314	+		Sama_1398	0.85	+1.5
1,695,315	-		Sama_1398	0.85	+0.3
1,695,315	-		Sama_1398	0.85	+0.2
1,695,315	-		Sama_1398	0.85	-0.6
1,695,315	-		Sama_1398	0.85	-0.5
1,695,315	-		Sama_1398	0.85	+1.4
1,695,318	+		Sama_1398	0.85	+0.3
1,695,318	+		Sama_1398	0.85	-2.3
1,695,318	+		Sama_1398	0.85	-0.6
1,695,318	+		Sama_1398	0.85	+1.2
1,695,319	-		Sama_1398	0.85	+0.1
1,695,319	-		Sama_1398	0.85	+2.4
1,695,319	-		Sama_1398	0.85	+1.5
1,695,319	-		Sama_1398	0.85	-0.8
1,695,443	-				+0.5
1,695,626	+				+0.2
1,695,626	+				+0.1
1,695,626	+				+2.1
1,695,626	+				+0.6
1,695,626	+				+1.0
1,695,626	+				-0.5
1,695,626	+				+0.7
1,695,626	+				-2.0
1,695,626	+				+0.0
1,695,627	-				-2.8
1,695,627	-				+0.1
1,695,627	-				-1.0
1,695,630	+				-1.8
1,695,667	+				-2.2
1,695,716	+				+1.0
1,695,756	+				+1.6
1,695,756	+				-1.4
1,695,757	-				+0.6
1,695,757	-				+0.3
1,695,771	+				-1.1
1,695,771	+				-0.2
1,695,772	-				+0.8
1,695,794	+				+0.5
1,695,794	+				-1.5
1,695,795	-				+0.3
1,695,795	-				-0.2
1,695,899	+				-0.6
1,695,900	-				-0.6
1,695,900	-				+0.1
1,695,937	+		Sama_1399	0.10	+2.6
1,695,938	-		Sama_1399	0.10	-1.0
1,695,997	+		Sama_1399	0.12	-0.8
1,695,997	+		Sama_1399	0.12	-1.8
1,695,998	-		Sama_1399	0.12	-1.0
1,695,998	-		Sama_1399	0.12	+0.4
1,695,998	-		Sama_1399	0.12	+0.4
1,695,998	-		Sama_1399	0.12	+0.3
1,695,998	-		Sama_1399	0.12	-0.7
1,695,998	-		Sama_1399	0.12	-0.8
1,696,005	-		Sama_1399	0.12	+2.0
1,696,005	-		Sama_1399	0.12	+0.3
1,696,031	+		Sama_1399	0.13	-0.5
1,696,031	+		Sama_1399	0.13	-0.6
1,696,031	+		Sama_1399	0.13	-0.4
1,696,031	+		Sama_1399	0.13	+1.0
1,696,031	+		Sama_1399	0.13	-1.3
1,696,032	-		Sama_1399	0.13	-0.4
1,696,032	-		Sama_1399	0.13	+0.4
1,696,032	-		Sama_1399	0.13	-0.3
1,696,131	+		Sama_1399	0.17	+1.3
1,696,132	-		Sama_1399	0.17	-1.5
1,696,132	-		Sama_1399	0.17	+2.0
1,696,132	-		Sama_1399	0.17	+0.3
1,696,169	-		Sama_1399	0.18	-0.8
1,696,289	+		Sama_1399	0.22	-0.4
1,696,289	+		Sama_1399	0.22	+0.1
1,696,289	+		Sama_1399	0.22	-0.5
1,696,290	-		Sama_1399	0.22	-0.4
1,696,290	-		Sama_1399	0.22	-0.5
1,696,310	+		Sama_1399	0.23	+0.5
1,696,311	-		Sama_1399	0.23	+0.2
1,696,311	-		Sama_1399	0.23	-0.8
1,696,329	+		Sama_1399	0.24	-0.9
1,696,329	+		Sama_1399	0.24	-1.3
1,696,364	+		Sama_1399	0.25	+0.8
1,696,364	+		Sama_1399	0.25	-1.5
1,696,375	+		Sama_1399	0.25	+2.1
1,696,375	+		Sama_1399	0.25	-0.2
1,696,375	+		Sama_1399	0.25	+0.4
1,696,375	+		Sama_1399	0.25	+0.7
1,696,376	-		Sama_1399	0.25	-1.2
1,696,376	-		Sama_1399	0.25	+0.7
1,696,379	+		Sama_1399	0.25	+0.7
1,696,379	+		Sama_1399	0.25	+1.1
1,696,379	+		Sama_1399	0.25	-0.2
1,696,379	+		Sama_1399	0.25	+0.5
1,696,380	-		Sama_1399	0.25	-1.8
1,696,380	-		Sama_1399	0.25	+2.6
1,696,380	-		Sama_1399	0.25	-3.6
1,696,380	-		Sama_1399	0.25	+0.7
1,696,380	-		Sama_1399	0.25	-1.3
1,696,395	-		Sama_1399	0.26	-1.5
1,696,395	-		Sama_1399	0.26	-2.2
1,696,395	-		Sama_1399	0.26	+0.2
1,696,395	-		Sama_1399	0.26	-0.3
1,696,397	+		Sama_1399	0.26	-0.3
1,696,398	-		Sama_1399	0.26	-0.5
1,696,398	-		Sama_1399	0.26	-0.8
1,696,398	-		Sama_1399	0.26	+1.2
1,696,400	+		Sama_1399	0.26	+2.3
1,696,400	+		Sama_1399	0.26	-0.2
1,696,400	+		Sama_1399	0.26	+0.8
1,696,401	-		Sama_1399	0.26	+1.1