Strain Fitness in Shewanella amazonensis SB2B around Sama_0937

Experiment: Minimal media, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, pH7
1,129,933	+		Sama_0936	0.26	-0.6
1,129,933	+		Sama_0936	0.26	-0.6
1,129,934	-		Sama_0936	0.26	+0.8
1,129,934	-		Sama_0936	0.26	+0.8
1,129,938	+		Sama_0936	0.26	-0.8
1,129,938	+		Sama_0936	0.26	-0.4
1,129,938	+		Sama_0936	0.26	-2.3
1,129,938	+		Sama_0936	0.26	-0.6
1,129,938	+		Sama_0936	0.26	-0.1
1,129,938	+		Sama_0936	0.26	-2.0
1,129,938	+		Sama_0936	0.26	+0.3
1,129,938	+		Sama_0936	0.26	-0.4
1,129,938	+		Sama_0936	0.26	+0.1
1,129,938	+		Sama_0936	0.26	-0.5
1,129,939	-		Sama_0936	0.26	-1.0
1,129,939	-		Sama_0936	0.26	+0.8
1,129,939	-		Sama_0936	0.26	-1.9
1,129,939	-		Sama_0936	0.26	+1.2
1,129,939	-		Sama_0936	0.26	-0.1
1,129,939	-		Sama_0936	0.26	-1.1
1,129,939	-		Sama_0936	0.26	+0.1
1,129,945	-		Sama_0936	0.27	-0.7
1,130,010	-		Sama_0936	0.32	+0.9
1,130,010	-		Sama_0936	0.32	-0.4
1,130,109	-		Sama_0936	0.39	+0.4
1,130,216	+		Sama_0936	0.48	+0.2
1,130,217	-		Sama_0936	0.48	+0.7
1,130,217	-		Sama_0936	0.48	+0.8
1,130,218	+		Sama_0936	0.48	+0.1
1,130,218	+		Sama_0936	0.48	-0.6
1,130,218	+		Sama_0936	0.48	+1.0
1,130,218	+		Sama_0936	0.48	-1.6
1,130,218	+		Sama_0936	0.48	+0.4
1,130,218	+		Sama_0936	0.48	-1.0
1,130,218	+		Sama_0936	0.48	-0.6
1,130,218	+		Sama_0936	0.48	-1.4
1,130,218	+		Sama_0936	0.48	+0.3
1,130,218	+		Sama_0936	0.48	-0.8
1,130,218	+		Sama_0936	0.48	-0.4
1,130,218	+		Sama_0936	0.48	+1.5
1,130,218	+		Sama_0936	0.48	-2.0
1,130,218	+		Sama_0936	0.48	-0.4
1,130,218	+		Sama_0936	0.48	-0.6
1,130,218	+		Sama_0936	0.48	+0.1
1,130,219	-		Sama_0936	0.48	-0.6
1,130,219	-		Sama_0936	0.48	-1.8
1,130,219	-		Sama_0936	0.48	+1.8
1,130,219	-		Sama_0936	0.48	+1.3
1,130,219	-		Sama_0936	0.48	-0.4
1,130,219	-		Sama_0936	0.48	-0.8
1,130,219	-		Sama_0936	0.48	+1.3
1,130,219	-		Sama_0936	0.48	-1.2
1,130,219	-		Sama_0936	0.48	+0.2
1,130,219	-		Sama_0936	0.48	+1.9
1,130,219	-		Sama_0936	0.48	+0.7
1,130,219	-		Sama_0936	0.48	+1.6
1,130,219	-		Sama_0936	0.48	+2.8
1,130,225	+		Sama_0936	0.48	-1.0
1,130,226	-		Sama_0936	0.48	-1.3
1,130,303	-		Sama_0936	0.54	-0.6
1,130,303	-		Sama_0936	0.54	+0.1
1,130,314	+		Sama_0936	0.55	+0.7
1,130,314	+		Sama_0936	0.55	-1.0
1,130,314	+		Sama_0936	0.55	+0.6
1,130,314	+		Sama_0936	0.55	-1.1
1,130,315	-		Sama_0936	0.55	+0.8
1,130,315	-		Sama_0936	0.55	-0.1
1,130,315	-		Sama_0936	0.55	+0.2
1,130,315	-		Sama_0936	0.55	-0.6
1,130,357	+		Sama_0936	0.59	-0.8
1,130,357	+		Sama_0936	0.59	-1.5
1,130,357	+		Sama_0936	0.59	+0.6
1,130,357	+		Sama_0936	0.59	+0.1
1,130,378	+		Sama_0936	0.60	-0.1
1,130,390	+		Sama_0936	0.61	-0.8
1,130,449	+		Sama_0936	0.66	-0.7
1,130,490	-		Sama_0936	0.69	-2.0
1,130,490	-		Sama_0936	0.69	-0.4
1,130,513	+		Sama_0936	0.71	+1.8
1,130,513	+		Sama_0936	0.71	+0.0
1,130,513	+		Sama_0936	0.71	-0.7
1,130,513	+		Sama_0936	0.71	+0.2
1,130,513	+		Sama_0936	0.71	-0.1
1,130,513	+		Sama_0936	0.71	+0.3
1,130,513	+		Sama_0936	0.71	-0.6
1,130,514	-		Sama_0936	0.71	+0.4
1,130,514	-		Sama_0936	0.71	+0.7
1,130,514	-		Sama_0936	0.71	+2.2
1,130,514	-		Sama_0936	0.71	+0.2
1,130,517	+		Sama_0936	0.71	+0.4
1,130,517	+		Sama_0936	0.71	+0.3
1,130,517	+		Sama_0936	0.71	+0.2
1,130,518	-		Sama_0936	0.71	-3.2
1,130,609	-		Sama_0936	0.78	+0.6
1,130,609	-		Sama_0936	0.78	-1.2
1,130,609	-		Sama_0936	0.78	-0.6
1,130,610	+		Sama_0936	0.78	-0.3
1,130,611	-		Sama_0936	0.78	-0.0
1,130,611	-		Sama_0936	0.78	-2.5
1,130,623	+		Sama_0936	0.79	-0.4
1,130,623	+		Sama_0936	0.79	+0.2
1,130,624	-		Sama_0936	0.79	-0.1
1,130,670	+		Sama_0936	0.83	+0.5
1,130,670	+		Sama_0936	0.83	-1.1
1,130,683	+		Sama_0936	0.84	+0.9
1,130,684	-		Sama_0936	0.84	-1.1
1,130,728	+		Sama_0936	0.87	+1.3
1,130,748	-		Sama_0936	0.89	-0.2
1,130,771	+				-2.0
1,130,772	-				-0.1
1,130,772	-				-0.1
1,130,772	-				-1.3
1,130,772	-				+0.8
1,130,775	+				+0.7
1,130,775	+				-0.6
1,130,775	+				+2.0
1,130,775	+				-1.3
1,130,775	+				-0.6
1,130,775	+				-0.8
1,130,775	+				+0.4
1,130,775	+				+0.9
1,130,775	+				+0.4
1,130,776	-				-0.7
1,130,776	-				+0.8
1,130,776	-				+1.6
1,130,776	-				+0.0
1,130,776	-				+0.7
1,130,776	-				-0.4
1,130,779	+				-0.0
1,130,779	+				+0.3
1,130,779	+				+2.2
1,130,779	+				+1.9
1,130,779	+				-0.0
1,130,779	+				+0.1
1,130,780	-				+1.2
1,130,780	-				-0.1
1,130,780	-				+2.0
1,130,787	+				+1.0
1,130,788	-				-0.8
1,130,809	+				-0.7
1,130,809	+				-1.1
1,130,809	+				+1.6
1,130,835	+				-0.2
1,130,879	+				+0.3
1,130,879	+				+0.1
1,130,879	+				+0.4
1,130,879	+				-0.3
1,130,880	-				-0.8
1,130,880	-				-0.4
1,130,880	-				-0.4
1,130,880	-				-1.1
1,130,980	-				-2.0
1,131,017	-		Sama_0937	0.11	-0.9
1,131,042	+		Sama_0937	0.14	-1.1
1,131,245	+		Sama_0937	0.34	-0.3
1,131,279	+		Sama_0937	0.37	+0.8
1,131,279	+		Sama_0937	0.37	-0.2
1,131,279	+		Sama_0937	0.37	-0.1
1,131,279	+		Sama_0937	0.37	-2.5
1,131,279	+		Sama_0937	0.37	+0.4
1,131,279	+		Sama_0937	0.37	-0.4
1,131,279	+		Sama_0937	0.37	-3.3
1,131,280	-		Sama_0937	0.37	-1.1
1,131,280	-		Sama_0937	0.37	-3.3
1,131,280	-		Sama_0937	0.37	-3.0
1,131,280	-		Sama_0937	0.37	-2.0
1,131,280	-		Sama_0937	0.37	-0.4
1,131,366	+		Sama_0937	0.46	-1.6
1,131,399	+		Sama_0937	0.49	-1.4
1,131,400	-		Sama_0937	0.49	-2.1
1,131,403	-		Sama_0937	0.49	-1.6
1,131,403	-		Sama_0937	0.49	-1.2
1,131,403	-		Sama_0937	0.49	+0.0
1,131,403	-		Sama_0937	0.49	-1.6
1,131,427	-		Sama_0937	0.52	+0.6
1,131,485	+		Sama_0937	0.57	-0.5
1,131,486	-		Sama_0937	0.58	-1.8
1,131,486	-		Sama_0937	0.58	-1.2
1,131,486	-		Sama_0937	0.58	-0.6
1,131,486	-		Sama_0937	0.58	+0.4
1,131,577	+		Sama_0937	0.67	-1.5
1,131,578	-		Sama_0937	0.67	+0.5
1,131,578	-		Sama_0937	0.67	-1.6
1,131,589	+		Sama_0937	0.68	-1.0
1,131,590	-		Sama_0937	0.68	-1.1
1,131,603	+		Sama_0937	0.69	-1.4
1,131,644	+		Sama_0937	0.73	-2.3
1,131,644	+		Sama_0937	0.73	-2.5
1,131,644	+		Sama_0937	0.73	-3.1
1,131,667	+		Sama_0937	0.75	-4.0
1,131,685	-		Sama_0937	0.77	-0.3
1,131,690	+		Sama_0937	0.78	-0.7
1,131,691	-		Sama_0937	0.78	-0.4
1,131,693	+		Sama_0937	0.78	-2.0
1,131,693	+		Sama_0937	0.78	-1.0
1,131,693	+		Sama_0937	0.78	-1.4
1,131,693	+		Sama_0937	0.78	-1.4
1,131,693	+		Sama_0937	0.78	+0.2
1,131,693	+		Sama_0937	0.78	-2.0
1,131,693	+		Sama_0937	0.78	-2.5
1,131,693	+		Sama_0937	0.78	-1.7
1,131,694	-		Sama_0937	0.78	-4.3
1,131,694	-		Sama_0937	0.78	-0.6
1,131,694	-		Sama_0937	0.78	-2.1
1,131,694	-		Sama_0937	0.78	-1.6
1,131,695	+		Sama_0937	0.78	+0.6
1,131,695	+		Sama_0937	0.78	-2.1
1,131,695	+		Sama_0937	0.78	-3.6
1,131,695	+		Sama_0937	0.78	-1.3
1,131,695	+		Sama_0937	0.78	-2.7
1,131,695	+		Sama_0937	0.78	-1.9
1,131,695	+		Sama_0937	0.78	-2.4
1,131,695	+		Sama_0937	0.78	-1.3
1,131,695	+		Sama_0937	0.78	-3.8
1,131,695	+		Sama_0937	0.78	-1.7
1,131,695	+		Sama_0937	0.78	+0.1
1,131,695	+		Sama_0937	0.78	-0.8
1,131,696	-		Sama_0937	0.78	-1.8
1,131,696	-		Sama_0937	0.78	-1.4
1,131,696	-		Sama_0937	0.78	-0.4
1,131,696	-		Sama_0937	0.78	-1.6
1,131,696	-		Sama_0937	0.78	-1.9
1,131,698	+		Sama_0937	0.79	-1.3
1,131,698	+		Sama_0937	0.79	+0.4
1,131,698	+		Sama_0937	0.79	-0.4
1,131,698	+		Sama_0937	0.79	-2.2
1,131,698	+		Sama_0937	0.79	-0.4
1,131,698	+		Sama_0937	0.79	-0.4
1,131,699	-		Sama_0937	0.79	-1.5
1,131,699	-		Sama_0937	0.79	-1.6
1,131,699	-		Sama_0937	0.79	-1.6
1,131,716	+		Sama_0937	0.80	-1.6
1,131,716	+		Sama_0937	0.80	-3.1
1,131,734	+		Sama_0937	0.82	-0.7
1,131,734	+		Sama_0937	0.82	-2.6
1,131,735	-		Sama_0937	0.82	-0.6
1,131,735	-		Sama_0937	0.82	-0.8
1,131,735	-		Sama_0937	0.82	-2.0
1,131,735	-		Sama_0937	0.82	-1.8
1,131,783	+		Sama_0937	0.87	-0.5
1,131,783	+		Sama_0937	0.87	-1.2
1,131,805	+		Sama_0937	0.89	-1.0
1,131,806	-		Sama_0937	0.89	+0.6
1,131,806	-		Sama_0937	0.89	-3.0
1,131,814	+				-1.4
1,131,814	+				-1.9
1,131,815	-				+0.4
1,131,815	-				-2.1
1,131,815	-				-1.6
1,131,849	+				+0.8
1,131,871	-				-0.6
1,131,884	+				-1.0
1,131,884	+				+0.2
1,131,885	-				-1.6
1,131,917	+				-1.6
1,131,928	+				-1.6
1,131,938	+				-1.6
1,131,942	-				+3.1
1,131,951	-				+2.8
1,131,995	+				-0.0
1,131,995	+				-1.5
1,131,995	+				-0.8
1,131,995	+				-1.0
1,132,007	-				+3.5
1,132,028	+				+1.2
1,132,028	+				+1.2
1,132,028	+				-1.8
1,132,028	+				+0.8
1,132,028	+				-0.0
1,132,028	+				-1.8
1,132,028	+				-1.5
1,132,029	-				+1.2
1,132,029	-				+0.2
1,132,029	-				+1.0
1,132,029	-				+2.0
1,132,030	+				-1.3
1,132,031	-				+0.2
1,132,031	-				+2.0
1,132,071	+				-0.8
1,132,071	+				-0.6
1,132,072	-				+2.9
1,132,157	+				+0.3
1,132,158	-				+3.7
1,132,158	-				+3.3
1,132,222	-				+3.4
1,132,231	-				+1.9
1,132,231	-				+2.8
1,132,234	+				-0.9
1,132,234	+				+2.6
1,132,241	+				+0.8
1,132,289	+				+1.4
1,132,306	-				+0.5
1,132,312	+				-0.5
1,132,315	+				+0.6
1,132,315	+				+2.0
1,132,315	+				+0.7
1,132,315	+				-0.1
1,132,316	-				-1.4
1,132,343	+				-2.0
1,132,343	+				+0.9
1,132,343	+				+1.1
1,132,343	+				+0.1
1,132,343	+				+0.1
1,132,343	+				+0.4
1,132,343	+				-0.6
1,132,343	+				+0.3
1,132,343	+				+1.0
1,132,344	-				+0.7
1,132,344	-				+2.2
1,132,344	-				-1.5
1,132,344	-				+1.9
1,132,349	+				-0.8
1,132,400	-				+0.2
1,132,405	+				-0.0
1,132,405	+				-0.3
1,132,405	+				-0.6
1,132,406	-				-0.1
1,132,406	-				-2.3
1,132,436	+				-0.1
1,132,445	+				+0.4
1,132,445	+				-1.2
1,132,522	+				+0.6
1,132,523	-				-1.8
1,132,536	-				+0.7
1,132,547	+				+1.2
1,132,553	+				-0.0
1,132,610	-		Sama_0938	0.11	-1.4
1,132,639	+		Sama_0938	0.12	+1.2
1,132,639	+		Sama_0938	0.12	+0.7
1,132,639	+		Sama_0938	0.12	-0.3
1,132,640	-		Sama_0938	0.12	-0.3
1,132,640	-		Sama_0938	0.12	-0.5
1,132,640	-		Sama_0938	0.12	-1.4
1,132,640	-		Sama_0938	0.12	-0.0
1,132,640	-		Sama_0938	0.12	+0.4
1,132,643	+		Sama_0938	0.12	+0.4
1,132,643	+		Sama_0938	0.12	-0.2
1,132,643	+		Sama_0938	0.12	+1.8
1,132,644	-		Sama_0938	0.12	-0.0
1,132,653	-		Sama_0938	0.12	+0.2
1,132,673	+		Sama_0938	0.13	+0.6
1,132,674	-		Sama_0938	0.13	+0.5
1,132,713	+		Sama_0938	0.14	+1.2
1,132,746	+		Sama_0938	0.16	+0.2
1,132,746	+		Sama_0938	0.16	+0.3
1,132,746	+		Sama_0938	0.16	-0.1
1,132,747	-		Sama_0938	0.16	+2.0
1,132,747	-		Sama_0938	0.16	+1.8
1,132,747	-		Sama_0938	0.16	+0.3
1,132,747	-		Sama_0938	0.16	-1.8
1,132,747	-		Sama_0938	0.16	-0.3
1,132,747	-		Sama_0938	0.16	+0.6
1,132,747	-		Sama_0938	0.16	-2.2
1,132,788	+		Sama_0938	0.17	+1.2
1,132,832	+		Sama_0938	0.19	+1.0
1,132,832	+		Sama_0938	0.19	-0.1
1,132,832	+		Sama_0938	0.19	+0.0
1,132,832	+		Sama_0938	0.19	-0.0
1,132,832	+		Sama_0938	0.19	+0.8
1,132,839	-		Sama_0938	0.19	+1.0
1,132,839	-		Sama_0938	0.19	+0.2
1,132,839	-		Sama_0938	0.19	-1.1
1,132,839	-		Sama_0938	0.19	-0.7
1,132,839	-		Sama_0938	0.19	+0.2
1,132,844	+		Sama_0938	0.19	+0.2
1,132,874	+		Sama_0938	0.20	+4.0
1,132,874	+		Sama_0938	0.20	-1.6
1,132,875	-		Sama_0938	0.21	+0.1
1,132,894	+		Sama_0938	0.21	+1.2
1,132,894	+		Sama_0938	0.21	+0.8
1,132,895	-		Sama_0938	0.21	-0.7
1,132,905	+		Sama_0938	0.22	+1.0
1,132,905	+		Sama_0938	0.22	+0.5
1,132,905	+		Sama_0938	0.22	+0.8
1,132,905	+		Sama_0938	0.22	-0.2
1,132,906	-		Sama_0938	0.22	-1.8
1,132,906	-		Sama_0938	0.22	+1.2