Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35870

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,755,124	+				+0.9
3,755,158	+				+0.0
3,755,158	+				+0.4
3,755,158	+				-0.6
3,755,158	+				-0.3
3,755,166	-				+0.1
3,755,168	+				-0.3
3,755,168	+				-0.3
3,755,168	+				-2.5
3,755,171	+				-2.7
3,755,176	-				-3.8
3,755,176	-				+0.2
3,755,176	-				-0.0
3,755,178	+				+0.4
3,755,178	+				-1.5
3,755,178	+				+0.4
3,755,186	-				+0.8
3,755,186	-				-0.3
3,755,186	-				+0.2
3,755,186	-				+0.4
3,755,186	-				-0.0
3,755,188	+				-2.0
3,755,188	+				-0.4
3,755,188	+				-1.0
3,755,188	+				+0.2
3,755,188	+				+2.3
3,755,188	+				-1.4
3,755,188	+				-0.1
3,755,188	+				-0.8
3,755,191	-				-0.7
3,755,193	+				+0.3
3,755,196	-				-1.1
3,755,196	-				+1.4
3,755,196	-				-0.6
3,755,196	-				+0.7
3,755,196	-				-0.8
3,755,196	-				+0.2
3,755,196	-				-0.1
3,755,196	-				+0.4
3,755,196	-				-0.9
3,755,196	-				-0.1
3,755,196	-				-1.4
3,755,196	-				-0.4
3,755,196	-				-0.4
3,755,196	-				+0.3
3,755,196	-				-1.2
3,755,196	-				+0.1
3,755,196	-				+0.2
3,755,196	-				-0.4
3,755,196	-				+1.6
3,755,196	-				-0.5
3,755,196	-				+0.6
3,755,196	-				+0.2
3,755,196	-				+0.8
3,755,198	+				-1.0
3,755,246	+				-1.1
3,755,246	-				+0.6
3,755,271	-				+0.6
3,755,285	+				+1.4
3,755,293	-		PGA1_c35850	0.11	+0.4
3,755,311	+		PGA1_c35850	0.16	-0.6
3,755,357	+		PGA1_c35850	0.27	-0.1
3,755,359	-		PGA1_c35850	0.28	-1.2
3,755,370	+		PGA1_c35850	0.30	-1.2
3,755,557	-		PGA1_c35850	0.77	-1.8
3,755,579	-		PGA1_c35850	0.82	-1.2
3,755,607	-		PGA1_c35850	0.89	+0.4
3,755,613	-				+0.7
3,755,644	-				-2.2
3,755,649	+				+1.3
3,755,682	-				-2.2
3,755,682	-				-1.6
3,755,729	+		PGA1_c35860	0.20	-0.7
3,755,729	+		PGA1_c35860	0.20	-0.7
3,755,729	+		PGA1_c35860	0.20	+0.2
3,755,729	+		PGA1_c35860	0.20	-3.3
3,755,729	+		PGA1_c35860	0.20	-0.4
3,755,729	+		PGA1_c35860	0.20	+0.3
3,755,729	+		PGA1_c35860	0.20	-1.7
3,755,734	+		PGA1_c35860	0.22	-0.6
3,755,737	-		PGA1_c35860	0.22	-0.4
3,755,737	-		PGA1_c35860	0.22	-0.5
3,755,737	-		PGA1_c35860	0.22	-1.0
3,755,737	-		PGA1_c35860	0.22	-1.2
3,755,737	-		PGA1_c35860	0.22	-1.0
3,755,737	-		PGA1_c35860	0.22	-0.2
3,755,737	-		PGA1_c35860	0.22	-1.4
3,755,757	-		PGA1_c35860	0.28	-0.5
3,755,757	-		PGA1_c35860	0.28	+1.1
3,755,769	+		PGA1_c35860	0.31	-1.2
3,755,777	-		PGA1_c35860	0.33	-1.8
3,755,795	+		PGA1_c35860	0.38	-0.1
3,755,874	-		PGA1_c35860	0.59	-1.0
3,755,874	-		PGA1_c35860	0.59	-0.2
3,755,918	-		PGA1_c35860	0.71	-1.6
3,755,927	+		PGA1_c35860	0.73	-1.4
3,755,936	+		PGA1_c35860	0.76	-2.5
3,755,944	-		PGA1_c35860	0.78	+0.7
3,755,973	+		PGA1_c35860	0.86	+0.3
3,756,000	+				-0.9
3,756,033	-				-0.0
3,756,076	-				-0.7
3,756,158	+				-0.4
3,756,258	+		PGA1_c35870	0.19	-1.7
3,756,268	-		PGA1_c35870	0.20	-2.0
3,756,279	+		PGA1_c35870	0.21	-1.7
3,756,287	-		PGA1_c35870	0.22	-0.9
3,756,289	+		PGA1_c35870	0.22	+1.9
3,756,310	-		PGA1_c35870	0.25	+1.4
3,756,317	+		PGA1_c35870	0.26	+1.4
3,756,373	-		PGA1_c35870	0.33	-0.1
3,756,382	-		PGA1_c35870	0.34	+0.4
3,756,384	+		PGA1_c35870	0.34	-1.0
3,756,407	+		PGA1_c35870	0.37	-1.1
3,756,412	+		PGA1_c35870	0.38	-1.9
3,756,417	+		PGA1_c35870	0.38	-0.1
3,756,425	-		PGA1_c35870	0.39	-1.3
3,756,425	-		PGA1_c35870	0.39	-0.0
3,756,451	+		PGA1_c35870	0.42	-0.3
3,756,459	-		PGA1_c35870	0.43	+1.2
3,756,459	-		PGA1_c35870	0.43	-0.2
3,756,459	-		PGA1_c35870	0.43	+0.7
3,756,471	-		PGA1_c35870	0.45	-0.4
3,756,476	-		PGA1_c35870	0.45	-0.6
3,756,482	+		PGA1_c35870	0.46	-1.0
3,756,490	-		PGA1_c35870	0.47	-2.2
3,756,490	-		PGA1_c35870	0.47	-1.0
3,756,509	-		PGA1_c35870	0.49	+1.5
3,756,523	+		PGA1_c35870	0.51	-0.7
3,756,523	+		PGA1_c35870	0.51	-0.1
3,756,531	-		PGA1_c35870	0.52	-1.4
3,756,546	-		PGA1_c35870	0.54	-0.2
3,756,607	+		PGA1_c35870	0.62	-1.4
3,756,615	-		PGA1_c35870	0.62	-2.7
3,756,615	-		PGA1_c35870	0.62	+0.1
3,756,643	+		PGA1_c35870	0.66	-2.7
3,756,673	+		PGA1_c35870	0.70	-0.8
3,756,678	+		PGA1_c35870	0.70	-1.9
3,756,683	+		PGA1_c35870	0.71	+0.7
3,756,686	-		PGA1_c35870	0.71	-0.5
3,756,686	-		PGA1_c35870	0.71	-1.2
3,756,686	-		PGA1_c35870	0.71	-0.5
3,756,686	-		PGA1_c35870	0.71	-2.2
3,756,686	-		PGA1_c35870	0.71	-1.1
3,756,686	-		PGA1_c35870	0.71	+1.8
3,756,686	-		PGA1_c35870	0.71	-2.2
3,756,688	+		PGA1_c35870	0.71	-2.3
3,756,691	-		PGA1_c35870	0.72	+0.2
3,756,725	+		PGA1_c35870	0.76	+0.8
3,756,725	+		PGA1_c35870	0.76	-1.4
3,756,733	-		PGA1_c35870	0.77	-1.0
3,756,733	-		PGA1_c35870	0.77	-2.2
3,756,733	-		PGA1_c35870	0.77	-0.2
3,756,733	-		PGA1_c35870	0.77	-1.5
3,756,750	+		PGA1_c35870	0.79	+0.0
3,756,758	+		PGA1_c35870	0.80	-0.2
3,756,766	-		PGA1_c35870	0.81	-0.1
3,756,794	+		PGA1_c35870	0.85	+0.5
3,756,794	+		PGA1_c35870	0.85	-2.5
3,756,802	-		PGA1_c35870	0.85	-0.5
3,756,844	+				+0.4
3,756,852	-				+0.0
3,756,852	-				-0.7
3,756,852	-				-0.2
3,756,852	-				-0.8
3,756,862	-				+0.5
3,756,872	+				-1.0
3,756,874	-				+1.2
3,756,875	-				-1.3
3,756,880	-				+0.4
3,756,911	+				-0.5
3,756,919	+				-1.1
3,756,945	+				-1.3
3,756,974	-				-1.0
3,756,974	-				-0.5
3,756,974	-				-2.0
3,756,974	-				-1.7
3,757,033	+				-0.0
3,757,033	+				-0.1
3,757,033	+				-2.3
3,757,033	+				-0.4
3,757,033	+				-2.3
3,757,033	+				-0.7
3,757,041	-				-0.0
3,757,041	-				+0.3
3,757,041	-				-0.5
3,757,041	-				-0.7
3,757,047	+				-1.3
3,757,057	+				-1.1
3,757,057	+				+0.9
3,757,057	+				-0.8
3,757,057	+				-1.3
3,757,057	+				-0.0
3,757,062	+				-0.9
3,757,065	-				-0.5
3,757,065	-				-0.5
3,757,065	-				-0.3
3,757,065	-				+0.6
3,757,067	+				+0.0
3,757,068	+				+1.0
3,757,069	+				-0.6
3,757,070	-				-0.4
3,757,076	-				-1.6
3,757,076	-				-0.2
3,757,076	-				-1.0
3,757,086	-				-2.0
3,757,135	-				+0.5
3,757,153	-				-1.0
3,757,153	-				-0.4
3,757,190	+		PGA1_c35880	0.17	-1.7
3,757,198	-		PGA1_c35880	0.19	-0.3
3,757,208	-		PGA1_c35880	0.22	+0.0
3,757,221	+		PGA1_c35880	0.26	-1.2
3,757,229	-		PGA1_c35880	0.28	-0.7
3,757,267	+		PGA1_c35880	0.39	-1.6
3,757,272	+		PGA1_c35880	0.40	+0.2
3,757,272	+		PGA1_c35880	0.40	+0.7
3,757,280	+		PGA1_c35880	0.42	-0.9
3,757,280	-		PGA1_c35880	0.42	+0.2
3,757,280	-		PGA1_c35880	0.42	-0.2
3,757,297	+		PGA1_c35880	0.47	+0.0
3,757,298	-		PGA1_c35880	0.47	-0.5
3,757,321	+		PGA1_c35880	0.54	-1.5
3,757,329	+		PGA1_c35880	0.56	-1.5
3,757,329	+		PGA1_c35880	0.56	-1.6
3,757,337	-		PGA1_c35880	0.58	-0.9
3,757,337	-		PGA1_c35880	0.58	-2.3
3,757,342	+		PGA1_c35880	0.59	-1.2
3,757,342	+		PGA1_c35880	0.59	+0.6
3,757,342	+		PGA1_c35880	0.59	-0.4
3,757,342	+		PGA1_c35880	0.59	-1.2
3,757,342	+		PGA1_c35880	0.59	-2.3
3,757,342	+		PGA1_c35880	0.59	+0.5
3,757,342	+		PGA1_c35880	0.59	+0.2
3,757,342	+		PGA1_c35880	0.59	+1.7
3,757,350	-		PGA1_c35880	0.62	-0.6
3,757,350	-		PGA1_c35880	0.62	-0.3
3,757,350	-		PGA1_c35880	0.62	-0.8
3,757,350	-		PGA1_c35880	0.62	-0.2
3,757,350	-		PGA1_c35880	0.62	+0.0
3,757,350	-		PGA1_c35880	0.62	-0.2
3,757,350	-		PGA1_c35880	0.62	-1.3
3,757,356	+		PGA1_c35880	0.63	-2.0
3,757,364	-		PGA1_c35880	0.66	+0.7
3,757,388	+		PGA1_c35880	0.72	-0.8
3,757,388	+		PGA1_c35880	0.72	-1.1
3,757,388	+		PGA1_c35880	0.72	-0.5
3,757,388	+		PGA1_c35880	0.72	-0.8
3,757,388	+		PGA1_c35880	0.72	-0.1
3,757,396	-		PGA1_c35880	0.74	-2.4
3,757,396	-		PGA1_c35880	0.74	-0.5
3,757,396	-		PGA1_c35880	0.74	-1.0
3,757,396	-		PGA1_c35880	0.74	-1.0
3,757,396	-		PGA1_c35880	0.74	-1.0
3,757,396	-		PGA1_c35880	0.74	-1.4
3,757,396	-		PGA1_c35880	0.74	-0.3
3,757,396	-		PGA1_c35880	0.74	+0.6
3,757,396	-		PGA1_c35880	0.74	-0.9
3,757,396	-		PGA1_c35880	0.74	+0.6
3,757,396	-		PGA1_c35880	0.74	+0.2
3,757,396	-		PGA1_c35880	0.74	-1.2
3,757,421	-		PGA1_c35880	0.81	+0.0
3,757,432	+		PGA1_c35880	0.84	+0.5
3,757,432	+		PGA1_c35880	0.84	-0.3
3,757,432	+		PGA1_c35880	0.84	+0.2
3,757,440	-		PGA1_c35880	0.87	-0.7
3,757,440	-		PGA1_c35880	0.87	-0.1
3,757,440	-		PGA1_c35880	0.87	-3.7
3,757,442	-		PGA1_c35880	0.87	-3.6
3,757,444	+		PGA1_c35880	0.88	-1.1
3,757,466	+				+0.6
3,757,489	+				-1.4
3,757,530	+		PGA1_c35890	0.17	+0.3
3,757,538	-		PGA1_c35890	0.20	+0.5
3,757,552	+		PGA1_c35890	0.25	-0.4
3,757,583	-		PGA1_c35890	0.35	+0.3
3,757,674	+		PGA1_c35890	0.67	+0.1
3,757,689	-		PGA1_c35890	0.72	-0.1
3,757,691	+		PGA1_c35890	0.73	-0.9
3,757,691	+		PGA1_c35890	0.73	-2.4
3,757,691	+		PGA1_c35890	0.73	-0.3
3,757,691	+		PGA1_c35890	0.73	+0.3
3,757,699	-		PGA1_c35890	0.75	-0.2
3,757,699	-		PGA1_c35890	0.75	-0.2
3,757,699	-		PGA1_c35890	0.75	-0.8
3,757,699	-		PGA1_c35890	0.75	+0.2
3,757,699	-		PGA1_c35890	0.75	-0.4
3,757,699	-		PGA1_c35890	0.75	-0.6
3,757,699	-		PGA1_c35890	0.75	-3.1
3,757,720	+		PGA1_c35890	0.82	+1.0
3,757,745	+				-1.3
3,757,763	+				-1.2
3,757,772	-				+0.3
3,757,789	-				-1.6
3,757,789	-				-3.3
3,757,855	+				-0.9
3,757,863	-				+0.2
3,757,863	-				-0.5
3,757,863	-				-0.5
3,757,876	-				-0.1