Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31050

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,241,287	+		PGA1_c31030	0.44	-0.5
3,241,287	+		PGA1_c31030	0.44	+0.2
3,241,295	+		PGA1_c31030	0.45	+0.4
3,241,295	-		PGA1_c31030	0.45	-0.8
3,241,297	+		PGA1_c31030	0.45	+0.7
3,241,305	+		PGA1_c31030	0.46	+0.8
3,241,312	+		PGA1_c31030	0.47	-0.1
3,241,312	-		PGA1_c31030	0.47	-0.2
3,241,312	-		PGA1_c31030	0.47	-0.7
3,241,312	-		PGA1_c31030	0.47	-0.3
3,241,323	-		PGA1_c31030	0.48	-0.5
3,241,351	+		PGA1_c31030	0.52	-2.0
3,241,351	+		PGA1_c31030	0.52	+1.2
3,241,352	-		PGA1_c31030	0.52	+0.1
3,241,352	-		PGA1_c31030	0.52	+0.8
3,241,383	-		PGA1_c31030	0.56	+0.3
3,241,445	+		PGA1_c31030	0.63	+0.6
3,241,445	+		PGA1_c31030	0.63	+0.3
3,241,446	-		PGA1_c31030	0.63	+0.4
3,241,453	-		PGA1_c31030	0.64	+0.1
3,241,453	-		PGA1_c31030	0.64	+0.2
3,241,457	+		PGA1_c31030	0.65	-0.1
3,241,457	+		PGA1_c31030	0.65	+0.8
3,241,457	+		PGA1_c31030	0.65	-0.2
3,241,461	-		PGA1_c31030	0.65	+1.0
3,241,461	-		PGA1_c31030	0.65	-0.2
3,241,465	-		PGA1_c31030	0.66	-0.7
3,241,465	-		PGA1_c31030	0.66	+0.0
3,241,465	-		PGA1_c31030	0.66	-0.1
3,241,465	-		PGA1_c31030	0.66	+0.2
3,241,465	-		PGA1_c31030	0.66	-1.1
3,241,467	+		PGA1_c31030	0.66	-0.7
3,241,470	+		PGA1_c31030	0.66	+1.2
3,241,475	-		PGA1_c31030	0.67	-0.4
3,241,478	+		PGA1_c31030	0.67	+0.1
3,241,478	+		PGA1_c31030	0.67	+0.4
3,241,478	+		PGA1_c31030	0.67	-0.2
3,241,478	+		PGA1_c31030	0.67	-0.4
3,241,478	+		PGA1_c31030	0.67	-1.4
3,241,478	+		PGA1_c31030	0.67	+0.1
3,241,478	+		PGA1_c31030	0.67	-0.5
3,241,478	+		PGA1_c31030	0.67	-0.4
3,241,478	-		PGA1_c31030	0.67	-0.1
3,241,486	+		PGA1_c31030	0.68	+0.8
3,241,486	-		PGA1_c31030	0.68	+0.6
3,241,486	-		PGA1_c31030	0.68	+0.8
3,241,486	-		PGA1_c31030	0.68	-0.2
3,241,486	-		PGA1_c31030	0.68	-0.3
3,241,486	-		PGA1_c31030	0.68	-3.4
3,241,486	-		PGA1_c31030	0.68	+1.4
3,241,500	+		PGA1_c31030	0.70	+0.4
3,241,500	+		PGA1_c31030	0.70	-2.7
3,241,500	+		PGA1_c31030	0.70	-0.0
3,241,503	+		PGA1_c31030	0.71	+0.3
3,241,508	-		PGA1_c31030	0.71	+1.2
3,241,522	+		PGA1_c31030	0.73	-1.3
3,241,522	+		PGA1_c31030	0.73	+0.8
3,241,522	+		PGA1_c31030	0.73	-0.1
3,241,530	-		PGA1_c31030	0.74	-0.3
3,241,530	-		PGA1_c31030	0.74	+0.3
3,241,541	+		PGA1_c31030	0.75	+0.6
3,241,564	+		PGA1_c31030	0.78	+0.4
3,241,568	-		PGA1_c31030	0.79	-2.2
3,241,572	-		PGA1_c31030	0.79	+0.2
3,241,572	-		PGA1_c31030	0.79	-0.3
3,241,605	-		PGA1_c31030	0.83	+0.1
3,241,626	+		PGA1_c31030	0.86	-0.1
3,241,634	-		PGA1_c31030	0.87	-2.5
3,241,634	-		PGA1_c31030	0.87	-0.5
3,241,636	+		PGA1_c31030	0.87	+0.8
3,241,641	+		PGA1_c31030	0.88	+0.7
3,241,649	-		PGA1_c31030	0.89	+0.3
3,241,649	-		PGA1_c31030	0.89	-0.5
3,241,678	-				-1.5
3,241,707	+				-1.6
3,241,716	-				-0.4
3,241,730	-				-0.1
3,242,345	-				-0.1
3,242,345	-				-0.0
3,242,368	+				-0.5
3,242,382	+				-0.6
3,242,382	+				+0.9
3,242,390	-				-0.2
3,242,394	+				-0.7
3,242,402	-				+1.1
3,242,416	-				-1.0
3,242,419	+				-0.5
3,242,427	-				+0.1
3,242,457	+				-3.2
3,242,569	+				+1.1
3,242,577	-				-0.1
3,242,586	+				-0.6
3,242,594	-				-0.4
3,242,607	+		PGA1_c31050	0.10	-3.1
3,242,607	+		PGA1_c31050	0.10	-0.3
3,242,615	-		PGA1_c31050	0.10	+0.2
3,242,615	-		PGA1_c31050	0.10	-0.3
3,242,615	-		PGA1_c31050	0.10	-0.2
3,242,615	-		PGA1_c31050	0.10	-0.7
3,242,621	+		PGA1_c31050	0.10	-1.1
3,242,628	-		PGA1_c31050	0.11	-0.2
3,242,698	+		PGA1_c31050	0.13	+0.3
3,242,706	-		PGA1_c31050	0.13	+0.5
3,242,712	-		PGA1_c31050	0.13	+0.9
3,242,760	-		PGA1_c31050	0.15	-3.1
3,242,760	-		PGA1_c31050	0.15	+0.4
3,242,762	+		PGA1_c31050	0.15	+1.4
3,242,769	-		PGA1_c31050	0.15	-1.2
3,242,770	-		PGA1_c31050	0.15	-2.3
3,242,817	+		PGA1_c31050	0.16	-0.3
3,242,825	-		PGA1_c31050	0.16	-0.8
3,242,905	+		PGA1_c31050	0.19	-0.0
3,242,905	+		PGA1_c31050	0.19	-0.3
3,242,905	+		PGA1_c31050	0.19	-0.6
3,242,960	+		PGA1_c31050	0.20	-0.3
3,242,979	-		PGA1_c31050	0.21	-0.2
3,243,042	+		PGA1_c31050	0.23	-0.1
3,243,058	+		PGA1_c31050	0.23	-0.5
3,243,082	+		PGA1_c31050	0.24	+0.1
3,243,085	-		PGA1_c31050	0.24	-0.4
3,243,085	-		PGA1_c31050	0.24	+0.8
3,243,099	+		PGA1_c31050	0.24	+0.8
3,243,099	+		PGA1_c31050	0.24	+0.9
3,243,100	-		PGA1_c31050	0.24	-0.2
3,243,107	-		PGA1_c31050	0.25	+0.2
3,243,107	-		PGA1_c31050	0.25	-0.5
3,243,107	-		PGA1_c31050	0.25	+1.7
3,243,107	-		PGA1_c31050	0.25	-0.6
3,243,152	+		PGA1_c31050	0.26	-0.6
3,243,188	-		PGA1_c31050	0.27	-2.5
3,243,198	-		PGA1_c31050	0.27	-0.4
3,243,261	+		PGA1_c31050	0.29	+1.2
3,243,261	+		PGA1_c31050	0.29	-2.5
3,243,324	+		PGA1_c31050	0.31	-0.4
3,243,359	+		PGA1_c31050	0.32	+0.6
3,243,364	+		PGA1_c31050	0.32	-0.7
3,243,367	+		PGA1_c31050	0.32	-0.0
3,243,367	+		PGA1_c31050	0.32	-0.2
3,243,375	-		PGA1_c31050	0.33	+0.5
3,243,377	+		PGA1_c31050	0.33	+0.1
3,243,385	-		PGA1_c31050	0.33	+1.0
3,243,404	+		PGA1_c31050	0.33	-0.9
3,243,432	-		PGA1_c31050	0.34	-0.9
3,243,432	-		PGA1_c31050	0.34	-1.7
3,243,441	+		PGA1_c31050	0.34	+0.5
3,243,441	+		PGA1_c31050	0.34	+1.2
3,243,444	-		PGA1_c31050	0.35	+0.5
3,243,449	-		PGA1_c31050	0.35	-1.0
3,243,471	+		PGA1_c31050	0.35	-0.8
3,243,479	+		PGA1_c31050	0.36	-1.5
3,243,493	+		PGA1_c31050	0.36	-2.8
3,243,493	+		PGA1_c31050	0.36	-0.0
3,243,493	+		PGA1_c31050	0.36	-0.2
3,243,501	-		PGA1_c31050	0.36	-0.9
3,243,501	-		PGA1_c31050	0.36	-0.2
3,243,501	-		PGA1_c31050	0.36	+0.4
3,243,532	-		PGA1_c31050	0.37	-1.1
3,243,549	+		PGA1_c31050	0.38	+0.3
3,243,560	-		PGA1_c31050	0.38	-1.2
3,243,565	+		PGA1_c31050	0.38	+0.8
3,243,567	+		PGA1_c31050	0.38	-0.9
3,243,575	-		PGA1_c31050	0.38	-0.8
3,243,613	+		PGA1_c31050	0.39	-0.5
3,243,613	+		PGA1_c31050	0.39	+0.2
3,243,613	+		PGA1_c31050	0.39	+0.1
3,243,613	+		PGA1_c31050	0.39	+1.1
3,243,614	-		PGA1_c31050	0.40	+0.5
3,243,621	-		PGA1_c31050	0.40	-0.6
3,243,621	-		PGA1_c31050	0.40	+0.1
3,243,621	-		PGA1_c31050	0.40	-0.0
3,243,621	-		PGA1_c31050	0.40	-0.2
3,243,621	-		PGA1_c31050	0.40	+0.0
3,243,716	-		PGA1_c31050	0.42	-0.6
3,243,719	+		PGA1_c31050	0.43	+0.1
3,243,725	-		PGA1_c31050	0.43	-0.0
3,243,725	-		PGA1_c31050	0.43	+0.2
3,243,727	-		PGA1_c31050	0.43	-0.8
3,243,727	-		PGA1_c31050	0.43	-0.2
3,243,736	+		PGA1_c31050	0.43	-0.3
3,243,744	-		PGA1_c31050	0.43	-0.7
3,243,774	-		PGA1_c31050	0.44	-0.9
3,243,786	+		PGA1_c31050	0.45	+0.6
3,243,796	+		PGA1_c31050	0.45	+0.6
3,243,835	-		PGA1_c31050	0.46	-0.1
3,243,847	-		PGA1_c31050	0.46	-0.2
3,243,894	+		PGA1_c31050	0.48	-0.2
3,243,901	+		PGA1_c31050	0.48	+0.5
3,243,901	+		PGA1_c31050	0.48	-0.4
3,243,901	+		PGA1_c31050	0.48	+0.8
3,243,901	+		PGA1_c31050	0.48	-0.5
3,243,901	+		PGA1_c31050	0.48	-0.8
3,243,909	-		PGA1_c31050	0.48	+0.8
3,243,909	-		PGA1_c31050	0.48	+0.2
3,243,909	-		PGA1_c31050	0.48	+0.4
3,243,909	-		PGA1_c31050	0.48	-0.1
3,243,909	-		PGA1_c31050	0.48	-0.0
3,243,981	-		PGA1_c31050	0.50	+0.3
3,243,990	+		PGA1_c31050	0.51	-0.3
3,243,990	+		PGA1_c31050	0.51	+1.0
3,243,991	-		PGA1_c31050	0.51	-0.3
3,243,991	-		PGA1_c31050	0.51	-1.6
3,243,998	-		PGA1_c31050	0.51	-1.1
3,244,026	-		PGA1_c31050	0.52	+0.9
3,244,047	+		PGA1_c31050	0.52	+0.2
3,244,048	+		PGA1_c31050	0.52	+0.6
3,244,048	+		PGA1_c31050	0.52	+0.6
3,244,055	-		PGA1_c31050	0.52	+0.5
3,244,056	-		PGA1_c31050	0.52	+0.1
3,244,069	-		PGA1_c31050	0.53	-2.1
3,244,088	-		PGA1_c31050	0.53	+0.1
3,244,100	+		PGA1_c31050	0.54	+0.2
3,244,103	-		PGA1_c31050	0.54	-0.6
3,244,108	-		PGA1_c31050	0.54	-0.2
3,244,108	-		PGA1_c31050	0.54	-1.0
3,244,115	+		PGA1_c31050	0.54	+0.4
3,244,115	+		PGA1_c31050	0.54	-1.1
3,244,123	-		PGA1_c31050	0.54	-0.7
3,244,158	-		PGA1_c31050	0.55	-0.6
3,244,196	-		PGA1_c31050	0.57	+0.3
3,244,237	-		PGA1_c31050	0.58	-2.2
3,244,251	-		PGA1_c31050	0.58	+0.1
3,244,267	-		PGA1_c31050	0.59	+0.9
3,244,301	-		PGA1_c31050	0.60	-1.5
3,244,305	+		PGA1_c31050	0.60	-0.0
3,244,370	-		PGA1_c31050	0.62	-0.0
3,244,392	+		PGA1_c31050	0.62	-1.4
3,244,392	+		PGA1_c31050	0.62	-0.6
3,244,434	+		PGA1_c31050	0.64	-0.3
3,244,439	-		PGA1_c31050	0.64	-1.4
3,244,439	-		PGA1_c31050	0.64	-0.6
3,244,463	+		PGA1_c31050	0.64	+0.3
3,244,463	+		PGA1_c31050	0.64	-0.2
3,244,463	+		PGA1_c31050	0.64	-2.7
3,244,463	+		PGA1_c31050	0.64	-1.0
3,244,463	+		PGA1_c31050	0.64	+0.0
3,244,471	-		PGA1_c31050	0.65	+0.4
3,244,471	-		PGA1_c31050	0.65	+0.2
3,244,482	+		PGA1_c31050	0.65	-0.6
3,244,531	+		PGA1_c31050	0.66	+0.8
3,244,531	+		PGA1_c31050	0.66	+1.0
3,244,536	+		PGA1_c31050	0.66	+1.1
3,244,541	+		PGA1_c31050	0.67	-1.2
3,244,592	+		PGA1_c31050	0.68	+0.5
3,244,657	-		PGA1_c31050	0.70	-1.4
3,244,665	+		PGA1_c31050	0.70	-0.3
3,244,677	-		PGA1_c31050	0.71	+0.1
3,244,691	-		PGA1_c31050	0.71	+0.2
3,244,719	+		PGA1_c31050	0.72	-0.3
3,244,727	-		PGA1_c31050	0.72	+0.1
3,244,750	-		PGA1_c31050	0.73	+0.1
3,244,750	-		PGA1_c31050	0.73	+0.2
3,244,761	+		PGA1_c31050	0.73	-0.5
3,244,766	+		PGA1_c31050	0.73	-0.7
3,244,766	+		PGA1_c31050	0.73	+2.4
3,244,766	+		PGA1_c31050	0.73	-0.2
3,244,766	+		PGA1_c31050	0.73	-1.2
3,244,774	-		PGA1_c31050	0.73	-0.8
3,244,774	-		PGA1_c31050	0.73	-0.5
3,244,774	-		PGA1_c31050	0.73	-0.3
3,244,796	-		PGA1_c31050	0.74	+0.6
3,244,816	+		PGA1_c31050	0.75	-0.6
3,244,824	-		PGA1_c31050	0.75	+0.5
3,244,829	+		PGA1_c31050	0.75	-0.1
3,244,839	+		PGA1_c31050	0.75	+0.4
3,244,840	+		PGA1_c31050	0.75	-0.3
3,244,917	+		PGA1_c31050	0.78	-1.5
3,244,927	-		PGA1_c31050	0.78	-1.0
3,244,947	+		PGA1_c31050	0.79	-0.5
3,244,960	-		PGA1_c31050	0.79	-0.0
3,244,965	-		PGA1_c31050	0.79	-1.2
3,244,974	-		PGA1_c31050	0.79	-1.5
3,245,030	+		PGA1_c31050	0.81	-1.0
3,245,031	-		PGA1_c31050	0.81	-0.5
3,245,078	-		PGA1_c31050	0.82	+0.4
3,245,078	-		PGA1_c31050	0.82	+0.4
3,245,165	+		PGA1_c31050	0.85	-1.2
3,245,165	+		PGA1_c31050	0.85	-0.3
3,245,165	+		PGA1_c31050	0.85	-0.6
3,245,165	+		PGA1_c31050	0.85	+1.8
3,245,172	+		PGA1_c31050	0.85	+0.1
3,245,172	+		PGA1_c31050	0.85	+0.4
3,245,172	+		PGA1_c31050	0.85	-0.8
3,245,172	+		PGA1_c31050	0.85	-2.3
3,245,172	+		PGA1_c31050	0.85	+0.2
3,245,172	+		PGA1_c31050	0.85	-1.0
3,245,172	+		PGA1_c31050	0.85	-0.2
3,245,172	+		PGA1_c31050	0.85	-0.2
3,245,173	-		PGA1_c31050	0.85	+0.3
3,245,173	-		PGA1_c31050	0.85	-2.4
3,245,177	+		PGA1_c31050	0.85	+0.4
3,245,177	+		PGA1_c31050	0.85	-0.1
3,245,177	+		PGA1_c31050	0.85	-0.1
3,245,180	+		PGA1_c31050	0.85	+1.1
3,245,180	-		PGA1_c31050	0.85	+0.2
3,245,180	-		PGA1_c31050	0.85	-0.8
3,245,185	+		PGA1_c31050	0.85	+0.7
3,245,185	+		PGA1_c31050	0.85	+0.5
3,245,185	+		PGA1_c31050	0.85	-0.5
3,245,185	-		PGA1_c31050	0.85	+0.9
3,245,188	-		PGA1_c31050	0.86	+0.6
3,245,237	+		PGA1_c31050	0.87	+1.2
3,245,243	+		PGA1_c31050	0.87	-0.9
3,245,252	+		PGA1_c31050	0.87	-0.1
3,245,252	+		PGA1_c31050	0.87	+1.1
3,245,252	+		PGA1_c31050	0.87	+0.8
3,245,252	+		PGA1_c31050	0.87	-0.8
3,245,252	+		PGA1_c31050	0.87	+0.1
3,245,252	+		PGA1_c31050	0.87	+0.2
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3,245,253	-		PGA1_c31050	0.87	-1.2
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3,245,260	-		PGA1_c31050	0.88	-1.2
3,245,260	-		PGA1_c31050	0.88	-3.1
3,245,260	-		PGA1_c31050	0.88	-1.1
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3,245,306	+		PGA1_c31050	0.89	+1.4
3,245,306	+		PGA1_c31050	0.89	-0.3
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3,245,314	-		PGA1_c31050	0.89	-0.1
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3,245,314	-		PGA1_c31050	0.89	-0.6
3,245,314	-		PGA1_c31050	0.89	+0.3
3,245,314	-		PGA1_c31050	0.89	+0.3
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3,245,351	+				-2.8
3,245,352	-				+0.8
3,245,353	+				-3.6
3,245,353	+				-1.1
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3,245,380	+				-0.4
3,245,380	-				+1.0
3,245,380	-				+1.2
3,245,427	+				-1.0
3,245,429	+				-0.6
3,245,430	-				+0.5
3,245,436	+				+0.4
3,245,437	-				+0.6
3,245,472	+				-1.0
3,245,484	+				+0.1
3,245,545	-				+1.2
3,245,553	-				-0.1
3,245,563	+				+1.1
3,245,580	-				+0.2
3,245,660	+				-0.3
3,245,702	+				-1.3
3,245,708	+				+0.3
3,245,716	-				+0.8
3,245,740	+				-0.3
3,245,763	+				+1.1
3,245,783	+				-1.0
3,245,832	+				+0.5
3,245,832	+				+0.1
3,245,832	+				+0.0
3,245,832	+				+0.3
3,245,832	+				-0.7
3,245,832	+				-0.0
3,245,832	+				-0.9
3,245,832	+				+0.0
3,245,832	+				-0.2
3,245,832	+				-0.3
3,245,832	+				+0.2
3,245,832	+				+1.3
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3,245,840	-		PGA1_c31060	0.11	+0.1
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3,245,840	-		PGA1_c31060	0.11	-0.0
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3,245,840	-		PGA1_c31060	0.11	+1.3
3,245,840	-		PGA1_c31060	0.11	-1.0
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3,245,840	-		PGA1_c31060	0.11	+0.3
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3,245,840	-		PGA1_c31060	0.11	-0.3
3,245,842	+		PGA1_c31060	0.11	-0.4
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3,245,850	-		PGA1_c31060	0.12	+1.1
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3,245,850	-		PGA1_c31060	0.12	+0.5
3,245,850	-		PGA1_c31060	0.12	+0.5
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3,245,980	+		PGA1_c31060	0.27	+0.1
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3,246,052	-		PGA1_c31060	0.35	-2.1
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3,246,158	-		PGA1_c31060	0.48	-0.1
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3,246,329	+		PGA1_c31060	0.68	+0.3
3,246,329	+		PGA1_c31060	0.68	+0.7
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3,246,379	+		PGA1_c31060	0.74	-0.4
3,246,379	+		PGA1_c31060	0.74	+0.1
3,246,379	+		PGA1_c31060	0.74	-0.8
3,246,379	+		PGA1_c31060	0.74	+1.2
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3,246,387	-		PGA1_c31060	0.75	+1.0
3,246,387	-		PGA1_c31060	0.75	-1.8
3,246,387	-		PGA1_c31060	0.75	-0.6
3,246,387	-		PGA1_c31060	0.75	+0.1
3,246,387	-		PGA1_c31060	0.75	+1.2
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3,246,420	-		PGA1_c31060	0.78	-1.2
3,246,420	-		PGA1_c31060	0.78	-0.5
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3,246,453	-		PGA1_c31060	0.82	+1.4
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3,246,463	+		PGA1_c31060	0.83	-0.5
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3,246,471	-		PGA1_c31060	0.84	+0.1
3,246,471	-		PGA1_c31060	0.84	+0.3
3,246,471	-		PGA1_c31060	0.84	-0.1
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3,246,668	-				-0.0
3,246,677	+				-0.0