Experiment: m.b. Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1798 and HP15_1799 are separated by 231 nucleotides HP15_1799 and HP15_1800 are separated by 62 nucleotides HP15_1800 and HP15_1801 are separated by 4 nucleotides
HP15_1798: HP15_1798 - sohB protein, peptidase U7 family, at 1,890,744 to 1,891,805
_1798
HP15_1799: HP15_1799 - sterol-binding domain protein, at 1,892,037 to 1,892,351
_1799
HP15_1800: HP15_1800 - conserved hypothetical protein, membrane, at 1,892,414 to 1,893,061
_1800
HP15_1801: HP15_1801 - methyl-accepting chemotaxis protein, at 1,893,066 to 1,894,771
_1801
Position (kb)
1892
1893
1894 Strain fitness (log2 ratio)
-1
0
1 at 1891.445 kb on + strand, within HP15_1798 at 1891.479 kb on + strand, within HP15_1798 at 1891.704 kb on + strand at 1892.011 kb on - strand at 1892.098 kb on + strand, within HP15_1799 at 1892.105 kb on - strand, within HP15_1799 at 1892.105 kb on - strand, within HP15_1799 at 1892.105 kb on - strand, within HP15_1799 at 1892.140 kb on - strand, within HP15_1799 at 1892.203 kb on + strand, within HP15_1799 at 1892.211 kb on - strand, within HP15_1799 at 1892.213 kb on + strand, within HP15_1799 at 1892.283 kb on + strand, within HP15_1799 at 1892.336 kb on + strand at 1892.635 kb on - strand, within HP15_1800 at 1892.642 kb on + strand, within HP15_1800 at 1892.658 kb on - strand, within HP15_1800 at 1892.841 kb on - strand, within HP15_1800 at 1892.867 kb on - strand, within HP15_1800 at 1892.906 kb on + strand, within HP15_1800 at 1893.018 kb on - strand at 1893.312 kb on + strand, within HP15_1801 at 1893.319 kb on + strand, within HP15_1801 at 1893.325 kb on - strand, within HP15_1801 at 1893.394 kb on - strand, within HP15_1801 at 1893.519 kb on - strand, within HP15_1801 at 1893.673 kb on - strand, within HP15_1801 at 1893.681 kb on - strand, within HP15_1801 at 1893.810 kb on - strand, within HP15_1801 at 1893.810 kb on - strand, within HP15_1801 at 1893.826 kb on + strand, within HP15_1801 at 1893.920 kb on + strand, within HP15_1801 at 1893.939 kb on - strand, within HP15_1801 at 1893.943 kb on + strand, within HP15_1801 at 1894.021 kb on - strand, within HP15_1801
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.32 mM remove 1,891,445 + HP15_1798 0.66 +0.4 1,891,479 + HP15_1798 0.69 +0.4 1,891,704 + +0.5 1,892,011 - -0.3 1,892,098 + HP15_1799 0.19 -0.6 1,892,105 - HP15_1799 0.22 -0.1 1,892,105 - HP15_1799 0.22 -0.1 1,892,105 - HP15_1799 0.22 +0.5 1,892,140 - HP15_1799 0.33 +0.0 1,892,203 + HP15_1799 0.53 -0.3 1,892,211 - HP15_1799 0.55 +0.4 1,892,213 + HP15_1799 0.56 +0.1 1,892,283 + HP15_1799 0.78 -0.1 1,892,336 + -0.1 1,892,635 - HP15_1800 0.34 +0.5 1,892,642 + HP15_1800 0.35 +0.6 1,892,658 - HP15_1800 0.38 +0.5 1,892,841 - HP15_1800 0.66 +0.3 1,892,867 - HP15_1800 0.70 +0.1 1,892,906 + HP15_1800 0.76 +0.2 1,893,018 - -0.6 1,893,312 + HP15_1801 0.14 +0.1 1,893,319 + HP15_1801 0.15 -0.1 1,893,325 - HP15_1801 0.15 +0.1 1,893,394 - HP15_1801 0.19 +1.3 1,893,519 - HP15_1801 0.27 +0.3 1,893,673 - HP15_1801 0.36 +1.1 1,893,681 - HP15_1801 0.36 +0.3 1,893,810 - HP15_1801 0.44 -0.1 1,893,810 - HP15_1801 0.44 +0.2 1,893,826 + HP15_1801 0.45 -0.7 1,893,920 + HP15_1801 0.50 +0.1 1,893,939 - HP15_1801 0.51 +0.7 1,893,943 + HP15_1801 0.51 +0.3 1,894,021 - HP15_1801 0.56 +0.3
Or see this region's nucleotide sequence