Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24670

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,573,540	-				+0.6
2,573,574	+				+1.1
2,573,574	+				+0.7
2,573,577	-				+0.9
2,573,582	-				+0.5
2,573,592	-				+0.2
2,573,650	-				+0.6
2,573,650	-				+1.7
2,573,666	-		PGA1_c24660	0.11	+1.2
2,573,692	+		PGA1_c24660	0.16	-0.0
2,573,693	-		PGA1_c24660	0.17	+1.6
2,573,748	+		PGA1_c24660	0.29	+0.0
2,573,768	+		PGA1_c24660	0.33	+1.7
2,573,797	+		PGA1_c24660	0.39	-0.8
2,573,801	-		PGA1_c24660	0.40	+0.3
2,573,805	-		PGA1_c24660	0.41	+0.8
2,573,805	-		PGA1_c24660	0.41	+1.0
2,573,821	+		PGA1_c24660	0.44	+1.0
2,573,826	+		PGA1_c24660	0.45	+1.7
2,573,826	+		PGA1_c24660	0.45	+0.5
2,573,833	+		PGA1_c24660	0.47	+0.6
2,573,834	-		PGA1_c24660	0.47	+0.8
2,573,834	-		PGA1_c24660	0.47	+1.8
2,573,834	-		PGA1_c24660	0.47	+1.4
2,573,838	+		PGA1_c24660	0.48	-0.2
2,573,867	+		PGA1_c24660	0.54	+0.6
2,573,875	-		PGA1_c24660	0.56	+0.8
2,573,885	+		PGA1_c24660	0.58	+1.0
2,573,899	+		PGA1_c24660	0.61	+3.8
2,573,917	+		PGA1_c24660	0.65	+1.3
2,573,926	+		PGA1_c24660	0.67	+0.1
2,573,926	+		PGA1_c24660	0.67	+2.1
2,573,934	-		PGA1_c24660	0.69	+0.9
2,573,959	+		PGA1_c24660	0.74	+0.7
2,573,959	+		PGA1_c24660	0.74	+0.4
2,573,959	+		PGA1_c24660	0.74	+1.0
2,573,959	+		PGA1_c24660	0.74	-0.5
2,573,959	+		PGA1_c24660	0.74	-0.4
2,573,959	+		PGA1_c24660	0.74	+1.2
2,573,959	+		PGA1_c24660	0.74	+1.5
2,573,967	-		PGA1_c24660	0.76	+1.4
2,573,967	-		PGA1_c24660	0.76	+1.9
2,573,967	-		PGA1_c24660	0.76	+1.0
2,573,967	-		PGA1_c24660	0.76	+1.3
2,573,967	-		PGA1_c24660	0.76	+0.2
2,573,967	-		PGA1_c24660	0.76	+0.4
2,573,967	-		PGA1_c24660	0.76	+1.2
2,573,967	-		PGA1_c24660	0.76	+1.7
2,573,985	+		PGA1_c24660	0.80	+1.7
2,574,005	-		PGA1_c24660	0.84	+1.3
2,574,019	+		PGA1_c24660	0.87	+0.4
2,574,025	+		PGA1_c24660	0.89	+1.4
2,574,025	+		PGA1_c24660	0.89	-1.5
2,574,025	+		PGA1_c24660	0.89	+0.9
2,574,025	+		PGA1_c24660	0.89	+0.1
2,574,025	+		PGA1_c24660	0.89	+0.7
2,574,025	+		PGA1_c24660	0.89	+0.8
2,574,025	+		PGA1_c24660	0.89	+0.6
2,574,025	+		PGA1_c24660	0.89	-0.8
2,574,025	+		PGA1_c24660	0.89	+1.6
2,574,025	+		PGA1_c24660	0.89	+1.2
2,574,025	+		PGA1_c24660	0.89	-3.6
2,574,025	+		PGA1_c24660	0.89	+0.9
2,574,025	+		PGA1_c24660	0.89	+1.6
2,574,025	+		PGA1_c24660	0.89	+1.5
2,574,025	+		PGA1_c24660	0.89	+0.5
2,574,025	+		PGA1_c24660	0.89	+1.6
2,574,025	+		PGA1_c24660	0.89	+1.4
2,574,025	+		PGA1_c24660	0.89	+0.9
2,574,025	+		PGA1_c24660	0.89	+0.8
2,574,025	+		PGA1_c24660	0.89	+1.8
2,574,025	+		PGA1_c24660	0.89	+0.8
2,574,025	+		PGA1_c24660	0.89	+0.2
2,574,033	-				+1.0
2,574,033	-				+1.3
2,574,033	-				+1.5
2,574,033	-				+1.1
2,574,033	-				+1.1
2,574,033	-				+1.7
2,574,033	-				+0.1
2,574,033	-				+2.0
2,574,033	-				+2.2
2,574,033	-				+1.0
2,574,033	-				+0.5
2,574,033	-				+1.3
2,574,033	-				-0.2
2,574,033	-				+0.7
2,574,033	-				+1.2
2,574,033	-				+0.8
2,574,033	-				+1.4
2,574,033	-				-1.0
2,574,033	-				+0.9
2,574,043	-				+1.4
2,574,061	+				+0.9
2,574,061	+				+1.1
2,574,061	+				+3.0
2,574,061	+				+0.8
2,574,061	+				-0.6
2,574,061	+				+0.2
2,574,069	-				+1.4
2,574,090	+				+1.9
2,574,090	+				+0.7
2,574,090	+				+1.1
2,574,098	+				+2.0
2,574,098	-				+1.2
2,574,098	-				+1.1
2,574,143	-				+0.6
2,574,167	+				+1.1
2,574,173	+				-0.0
2,574,173	+				+1.6
2,574,173	+				+1.6
2,574,181	-				-1.7
2,574,181	-				+0.3
2,574,181	-				-0.2
2,574,198	+				+0.9
2,574,198	+				+0.9
2,574,199	+				+0.4
2,574,199	-				+0.8
2,574,200	+				+0.8
2,574,200	+				+1.8
2,574,200	+				+0.0
2,574,200	+				+1.1
2,574,200	+				+0.5
2,574,200	-				+1.4
2,574,200	-				-0.8
2,574,206	-				+1.2
2,574,207	-				+0.8
2,574,207	-				+1.9
2,574,207	-				-0.8
2,574,208	-				+0.4
2,574,208	-				+1.1
2,574,208	-				+1.2
2,574,208	-				+1.0
2,574,208	-				-0.4
2,574,208	-				+1.0
2,574,208	-				+0.1
2,574,210	+				+0.5
2,574,211	+				+2.0
2,574,211	+				+0.7
2,574,211	+				+1.9
2,574,211	+				+0.4
2,574,211	+				-1.0
2,574,211	+				+1.1
2,574,211	+				+0.2
2,574,211	+				+0.5
2,574,211	+				-0.0
2,574,211	+				-0.8
2,574,216	+				+1.8
2,574,216	+				+0.5
2,574,219	-				+0.7
2,574,219	-				+1.0
2,574,219	-				+0.7
2,574,219	-				+0.3
2,574,219	-				+1.0
2,574,219	-				+0.9
2,574,219	-				+0.6
2,574,219	-				+0.9
2,574,221	+				+1.7
2,574,224	-				+1.2
2,574,226	-				+1.5
2,574,235	+				+0.9
2,574,237	+				+1.3
2,574,243	-				+2.8
2,574,245	-				-0.7
2,574,255	+				+0.0
2,574,256	+				+1.6
2,574,328	+				+0.1
2,574,338	+				+0.8
2,574,361	+				+0.5
2,574,362	+				+0.6
2,574,369	-				+0.1
2,574,414	-				+1.8
2,574,446	-				+0.6
2,574,458	-				+1.4
2,574,493	-				+1.3
2,574,521	+				+2.4
2,574,540	-		PGA1_c24670	0.12	+1.3
2,574,546	-		PGA1_c24670	0.14	+0.0
2,574,550	+		PGA1_c24670	0.14	+0.2
2,574,562	+		PGA1_c24670	0.16	+0.3
2,574,562	+		PGA1_c24670	0.16	+0.8
2,574,562	+		PGA1_c24670	0.16	+0.6
2,574,562	+		PGA1_c24670	0.16	+0.2
2,574,562	+		PGA1_c24670	0.16	+1.5
2,574,564	+		PGA1_c24670	0.17	+1.6
2,574,570	-		PGA1_c24670	0.17	+0.2
2,574,570	-		PGA1_c24670	0.17	-0.1
2,574,597	+		PGA1_c24670	0.22	+0.5
2,574,597	+		PGA1_c24670	0.22	+1.7
2,574,597	+		PGA1_c24670	0.22	+0.4
2,574,602	+		PGA1_c24670	0.23	+2.4
2,574,605	-		PGA1_c24670	0.23	+1.5
2,574,605	-		PGA1_c24670	0.23	+0.1
2,574,605	-		PGA1_c24670	0.23	+1.1
2,574,642	+		PGA1_c24670	0.29	-1.0
2,574,674	+		PGA1_c24670	0.35	+1.9
2,574,698	+		PGA1_c24670	0.39	+0.6
2,574,698	+		PGA1_c24670	0.39	-0.5
2,574,742	-		PGA1_c24670	0.46	+0.1
2,574,752	+		PGA1_c24670	0.48	-1.4
2,574,760	-		PGA1_c24670	0.49	-0.3
2,574,800	+		PGA1_c24670	0.56	+0.7
2,574,800	+		PGA1_c24670	0.56	+0.9
2,574,800	+		PGA1_c24670	0.56	+0.8
2,574,844	-		PGA1_c24670	0.63	-0.3
2,574,844	-		PGA1_c24670	0.63	+1.0
2,574,947	-		PGA1_c24670	0.80	+0.3
2,574,964	+		PGA1_c24670	0.83	+0.9
2,575,028	+				-0.2
2,575,036	-				-0.4
2,575,062	-				-0.1
2,575,073	+				-0.7
2,575,076	-				+1.9
2,575,133	+				+0.3
2,575,214	-				+1.6
2,575,225	-		PGA1_c24680	0.10	+0.6
2,575,296	+		PGA1_c24680	0.18	-0.2
2,575,296	-		PGA1_c24680	0.18	+0.8
2,575,323	-		PGA1_c24680	0.21	+0.2
2,575,332	-		PGA1_c24680	0.22	-0.1
2,575,354	+		PGA1_c24680	0.24	+0.3
2,575,426	+		PGA1_c24680	0.31	+1.3
2,575,465	+		PGA1_c24680	0.35	-1.6
2,575,473	+		PGA1_c24680	0.36	-0.4
2,575,481	-		PGA1_c24680	0.37	+1.3
2,575,481	-		PGA1_c24680	0.37	+0.5
2,575,597	+		PGA1_c24680	0.49	+0.1
2,575,650	-		PGA1_c24680	0.55	+0.8
2,575,719	-		PGA1_c24680	0.62	-0.1
2,575,796	-		PGA1_c24680	0.70	+0.3
2,575,847	-		PGA1_c24680	0.75	-0.1
2,575,873	+		PGA1_c24680	0.78	-1.4
2,575,881	-		PGA1_c24680	0.79	-0.7
2,575,890	+		PGA1_c24680	0.80	-0.3
2,576,048	+				-0.4